RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-208	ENST00000559686	ZGPAT	Q8N5A5	531 aa	Known RBP	11.13	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TRPV1	Q8NER1	839 aa		11.13	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.13	□□□□□ -0.63
SNRPA1-208	ENST00000559686	NECAB3	Q96P71	396 aa	Predicted RBP	11.13	□□□□□ -0.63
SNRPA1-208	ENST00000559686	UHRF1	Q96T88	793 aa	Predicted RBP	11.13	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TBC1D2	Q9BYX2	928 aa		11.13	□□□□□ -0.63
SNRPA1-208	ENST00000559686	SIPA1L1	O43166	1804 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	GDF11	O95390	407 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	DNAJB2	P25686	324 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ITGB8	P26012	769 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	HOXA7	P31268	230 aa	Predicted RBP	11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ADCYAP1R1	P41586	468 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	RFX5	P48382	616 aa	Predicted RBP	11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	BACE1	P56817	501 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	MECOM	Q03112	1051 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	CCDC184	Q52MB2	194 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	CCDC102B	Q68D86	513 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	POTEE	Q6S8J3	1075 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	IL27	Q8NEV9	243 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	NPLOC4	Q8TAT6	608 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ASB2	Q96Q27	587 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ZNF576	Q9H609	170 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	CEP126	Q9P2H0	1117 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	XIRP2	A4UGR9	3374 aa		11.12	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TTC28	Q96AY4	2481 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	MSC	O60682	206 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	GLRX3	O76003	335 aa	Known RBP	11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	RASGRF1	Q13972	1273 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ERICH6	Q7L0X2	663 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TEX11	Q8IYF3	940 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ARRDC4	Q8NCT1	418 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	GAS2L1	Q99501	681 aa	Predicted RBP	11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	WDR18	Q9BV38	432 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	PRDM12	Q9H4Q4	367 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	THEG	Q9P2T0	379 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	IVNS1ABP	Q9Y6Y0	642 aa		11.11	□□□□□ -0.63
SNRPA1-208	ENST00000559686	PLXNA1	Q9UIW2	1896 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	GPR75-ASB3	A0A0A6YYF3	556 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	USP17L10	C9JJH3	530 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	SEMA3E	O15041	775 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	CNMD	O75829	334 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ASNS	P08243	561 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	IGFBP4	P22692	258 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	PTPRE	P23469	700 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TLE2	Q04725	743 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	PRAMEF19	Q5SWL8	479 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	CCDC129	Q6ZRS4	1044 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ZNF384	Q8TF68	577 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TIFA	Q96CG3	184 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	PA2G4	Q9UQ80	394 aa	Known RBP	11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	PCDHB13	Q9Y5F0	798 aa		11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TCF20	Q9UGU0	1960 aa	Known RBP	11.1	□□□□□ -0.63
SNRPA1-208	ENST00000559686	SLC15A5	A6NIM6	579 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	GRXCR1	A8MXD5	290 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	C19orf81	C9J6K1	198 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	RAG1	P15918	1043 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	PBX2	P40425	430 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	VASP	P50552	380 aa	Predicted RBP	11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TIMM10	P62072	90 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	CCNA1	P78396	465 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	MRPS5	P82675	430 aa	Known RBP	11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TBC1D9	Q6ZT07	1266 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	FAM163A	Q96GL9	167 aa	Predicted RBP	11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	TRIM34	Q9BYJ4	488 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	EMILIN3	Q9NT22	766 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	RAI14	Q9P0K7	980 aa		11.09	□□□□□ -0.63
SNRPA1-208	ENST00000559686	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	PQBP1	O60828	265 aa	Known RBP	11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	SEC24B	O95487	1268 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	CYBA	P13498	195 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	PI16	Q6UXB8	463 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	DPP9	Q86TI2	863 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	MAPKAPK5	Q8IW41	473 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	MICALL1	Q8N3F8	863 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	FEZ1	Q99689	392 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	USP44	Q9H0E7	712 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	DNAJC18	Q9H819	358 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	SAP30BP	Q9UHR5	308 aa	Known RBP	11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	HERC5	Q9UII4	1024 aa	Known RBP	11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	ZBTB21	Q9ULJ3	1066 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	RABGAP1	Q9Y3P9	1069 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	TACC3	Q9Y6A5	838 aa		11.08	□□□□□ -0.64
SNRPA1-208	ENST00000559686	CDK5RAP2	Q96SN8	1893 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	TTLL13P	A6NNM8	815 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	LDHC	P07864	332 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	CLTB	P09497	229 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	FPGS	Q05932	587 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	LRRC41	Q15345	812 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	FAM47A	Q5JRC9	791 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	USP17L2	Q6R6M4	530 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	WDR63	Q8IWG1	891 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	BTBD7	Q9P203	1132 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	PI4KB	Q9UBF8	816 aa		11.07	□□□□□ -0.64
SNRPA1-208	ENST00000559686	GTF3C3	Q9Y5Q9	886 aa		11.07	□□□□□ -0.64

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