RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ASCC2Q9H1I8 757 aaPredicted RBP15.11■□□□□ 0.01
LRRC28-214ENST00000559433 ARPP21Q9UBL0 812 aaPredicted RBP15.11■□□□□ 0.01
LRRC28-214ENST00000559433 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
LRRC28-214ENST00000559433 M0R2C6 588 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 GPAA1O43292 621 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 GCLCP48506 637 aaPredicted RBP15.1■□□□□ 0.01
LRRC28-214ENST00000559433 SEPT2Q15019 361 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 B4GALNT3Q6L9W6 998 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 CTR9Q6PD62 1173 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 ARMC5Q96C12 935 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 EMILIN3Q9NT22 766 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 SRRDQ9UH36 339 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 MYPNQ86TC9 1320 aa15.1■□□□□ 0.01
LRRC28-214ENST00000559433 GSG1L2A8MUP6 293 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 MYCP01106 439 aaPredicted RBP15.09■□□□□ 0.01
LRRC28-214ENST00000559433 IGHDP01880 384 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 HOXA7P31268 230 aaPredicted RBP15.09■□□□□ 0.01
LRRC28-214ENST00000559433 GUCY1A2P33402 732 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 USP14P54578 494 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 PDE1AP54750 535 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 FAM110CQ1W6H9 321 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 CCAR1Q8IX12 1150 aaKnown RBP15.09■□□□□ 0.01
LRRC28-214ENST00000559433 SMC5Q8IY18 1101 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 ACER1Q8TDN7 264 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 COA7Q96BR5 231 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 KIAA1683Q9H0B3 1180 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 STAP2Q9UGK3 403 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 DOCK3Q8IZD9 2030 aa15.09■□□□□ 0.01
LRRC28-214ENST00000559433 SMIM22K7EJ46 135 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 TNPO2O14787 897 aaKnown RBP15.08■□□□□ 0
LRRC28-214ENST00000559433 AKR1B1P15121 316 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 GNAT2P19087 354 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 TDO2P48775 406 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 CDK8P49336 464 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 PRKCZQ05513 592 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 GIMAP6Q6P9H5 292 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 TMEM179Q6ZVK1 233 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 C16orf86Q6ZW13 317 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 SH3TC2Q8TF17 1288 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 C12orf42Q96LP6 360 aa15.08■□□□□ 0
LRRC28-214ENST00000559433 APPP05067 770 aa15.07■□□□□ 0
LRRC28-214ENST00000559433 GRK4P32298 578 aa15.07■□□□□ 0
LRRC28-214ENST00000559433 HERVK_113P62684 666 aa15.07■□□□□ 0
LRRC28-214ENST00000559433 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
LRRC28-214ENST00000559433 ZMYM1Q5SVZ6 1142 aa15.07■□□□□ 0
LRRC28-214ENST00000559433 CHD1LQ86WJ1 897 aa15.07■□□□□ 0
LRRC28-214ENST00000559433 EVI5LQ96CN4 794 aa15.07■□□□□ 0
LRRC28-214ENST00000559433 ZNF333Q96JL9 665 aa15.07■□□□□ 0
LRRC28-214ENST00000559433 SEC62Q99442 399 aaKnown RBP15.07■□□□□ 0
LRRC28-214ENST00000559433 P2RX7Q99572 595 aaKnown RBP15.07■□□□□ 0
LRRC28-214ENST00000559433 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
LRRC28-214ENST00000559433 MINDY4BA8MYZ0 360 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 VCAM1P19320 739 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 UBXN2AP68543 259 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 NUCB1Q02818 461 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 ICA1Q05084 483 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 SBK1Q52WX2 424 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 CLEC10AQ8IUN9 316 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 CCDC17Q96LX7 622 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 CWC22Q9HCG8 908 aaKnown RBP15.06■□□□□ 0
LRRC28-214ENST00000559433 EPB41L4AQ9HCS5 686 aaPredicted RBP15.06■□□□□ 0
LRRC28-214ENST00000559433 MORF4L1Q9UBU8 362 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 GABRQQ9UN88 632 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 KIAA0100Q14667 2235 aaKnown RBP15.06■□□□□ 0
LRRC28-214ENST00000559433 ROBO3Q96MS0 1386 aa15.06■□□□□ 0
LRRC28-214ENST00000559433 A0A1W2PRG0 241 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L15C9J2P7 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L13C9JLJ4 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L11C9JVI0 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L18D6R9N7 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L22D6RA61 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L17D6RBQ6 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L19D6RCP7 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L20D6RJB6 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 USP17L24Q0WX57 530 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 STK11IPQ8N1F8 1099 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 GPRC5AQ8NFJ5 357 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 GTF3C2Q8WUA4 911 aaPredicted RBP15.05■□□□□ -0
LRRC28-214ENST00000559433 NACAP1Q9BZK3 213 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 ARHGEF10LQ9HCE6 1279 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 PLXNB2O15031 1838 aa15.05■□□□□ -0
LRRC28-214ENST00000559433 TNRC18O15417 2968 aaPredicted RBP15.05■□□□□ -0
LRRC28-214ENST00000559433 MYH4Q9Y623 1939 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 PARP14Q460N5 1801 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 POTEFA5A3E0 1075 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 TRIM6-TRIM34B2RNG4 842 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 PATL2C9JE40 543 aaKnown RBP15.04■□□□□ -0
LRRC28-214ENST00000559433 PEX10O60683 326 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 EN2P19622 333 aaPredicted RBP15.04■□□□□ -0
LRRC28-214ENST00000559433 FLT3LGP49771 235 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 CATSPERGQ6ZRH7 1159 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 IFNL3Q8IZI9 196 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 SLAIN1Q8ND83 568 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 PAGR1Q9BTK6 254 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 RPAP3Q9H6T3 665 aaPredicted RBP15.04■□□□□ -0
LRRC28-214ENST00000559433 SH2D4AQ9H788 454 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 MKNK2Q9HBH9 465 aa15.04■□□□□ -0
LRRC28-214ENST00000559433 TXNRD2Q9NNW7 524 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms