RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 HPS5Q9UPZ3 1129 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 SALL3Q9BXA9 1300 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 MAST2Q6P0Q8 1798 aa5.21□□□□□ -1.57
SNX1-205ENST00000559339 GSG1L2A8MUP6 293 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L15C9J2P7 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L13C9JLJ4 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L11C9JVI0 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L18D6R9N7 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L22D6RA61 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L17D6RBQ6 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L19D6RCP7 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L20D6RJB6 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 TNPO2O14787 897 aaKnown RBP5.21□□□□□ -1.58
SNX1-205ENST00000559339 CHGBP05060 677 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 NEFLP07196 543 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 CYP2D6P10635 497 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 PSMC4P43686 418 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 CDK8P49336 464 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 VASPP50552 380 aaPredicted RBP5.21□□□□□ -1.58
SNX1-205ENST00000559339 ATP2B2Q01814 1243 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 ICA1Q05084 483 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 USP17L24Q0WX57 530 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 MOGSQ13724 837 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 RRP1BQ14684 758 aaKnown RBP5.21□□□□□ -1.58
SNX1-205ENST00000559339 SEPT2Q15019 361 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 ZYXQ15942 572 aaKnown RBP5.21□□□□□ -1.58
SNX1-205ENST00000559339 FAM110CQ1W6H9 321 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 SLC9C1Q4G0N8 1177 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 PPP4R3BQ5MIZ7 849 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 ZMYM1Q5SVZ6 1142 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 TREML2Q5T2D2 321 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 PLEKHM2Q8IWE5 1019 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 IFNL3Q8IZI9 196 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 SPDYE1Q8NFV5 336 aaPredicted RBP5.21□□□□□ -1.58
SNX1-205ENST00000559339 RAET1EQ8TD07 263 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 LPAR1Q92633 364 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 COA7Q96BR5 231 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 DYNLL2Q96FJ2 89 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 KIAA1683Q9H0B3 1180 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 ASCC2Q9H1I8 757 aaPredicted RBP5.21□□□□□ -1.58
SNX1-205ENST00000559339 DIAPH3Q9NSV4 1193 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 PTPN22Q9Y2R2 807 aa5.21□□□□□ -1.58
SNX1-205ENST00000559339 CYP2D7A0A087X1C5 515 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 M0R2C6 588 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 RAD21O60216 631 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 ECM2O94769 699 aaPredicted RBP5.2□□□□□ -1.58
SNX1-205ENST00000559339 TSPY3P0CV98 308 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 TSPY8P0CW00 308 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 BCRP11274 1271 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 AKR1B1P15121 316 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 VCAM1P19320 739 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 SDSP20132 328 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 HERVK_113P62684 666 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 CCNA1P78396 465 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 PPARAQ07869 468 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 COG2Q14746 738 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 SHROOM1Q2M3G4 852 aaPredicted RBP5.2□□□□□ -1.58
SNX1-205ENST00000559339 STK11IPQ8N1F8 1099 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 SLC44A5Q8NCS7 719 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 GPRC5AQ8NFJ5 357 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 TRIM47Q96LD4 638 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 C12orf42Q96LP6 360 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 SEC62Q99442 399 aaKnown RBP5.2□□□□□ -1.58
SNX1-205ENST00000559339 TANGO6Q9C0B7 1094 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 CWC22Q9HCG8 908 aaKnown RBP5.2□□□□□ -1.58
SNX1-205ENST00000559339 GOPCQ9HD26 462 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 EMILIN3Q9NT22 766 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 HOXC10Q9NYD6 342 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 BIN2Q9UBW5 565 aaPredicted RBP5.2□□□□□ -1.58
SNX1-205ENST00000559339 SRRDQ9UH36 339 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 CASP8AP2Q9UKL3 1982 aa5.2□□□□□ -1.58
SNX1-205ENST00000559339 DOCK2Q92608 1830 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 OTOFQ9HC10 1997 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 TSPY2A6NKD2 308 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 FLOT1O75955 427 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 TTLL1O95922 423 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 HSPD1P10809 573 aaKnown RBP5.19□□□□□ -1.58
SNX1-205ENST00000559339 EEF2P13639 858 aaKnown RBP5.19□□□□□ -1.58
SNX1-205ENST00000559339 MAPK4P31152 587 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 GUCY1A2P33402 732 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 NT5C2P49902 561 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 JAG1P78504 1218 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 CWC27Q6UX04 472 aaKnown RBP5.19□□□□□ -1.58
SNX1-205ENST00000559339 CATSPERGQ6ZRH7 1159 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 SPICE1Q8N0Z3 855 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 PLCD3Q8N3E9 789 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 MB21D1Q8N884 522 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 SLAIN1Q8ND83 568 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 ACER1Q8TDN7 264 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 RUFY2Q8WXA3 655 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 FAM227BQ96M60 508 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 P2RX7Q99572 595 aaKnown RBP5.19□□□□□ -1.58
SNX1-205ENST00000559339 TMEM106CQ9BVX2 250 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 ARHGAP39Q9C0H5 1083 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 RNF41Q9H4P4 317 aaPredicted RBP5.19□□□□□ -1.58
SNX1-205ENST00000559339 RPAP3Q9H6T3 665 aaPredicted RBP5.19□□□□□ -1.58
SNX1-205ENST00000559339 VCPKMTQ9H867 229 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 EPB41L4AQ9HCS5 686 aaPredicted RBP5.19□□□□□ -1.58
SNX1-205ENST00000559339 TOMM22Q9NS69 142 aa5.19□□□□□ -1.58
SNX1-205ENST00000559339 CTNNA3Q9UI47 895 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms