RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 ERVK-9P63128 1117 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 ERVK-24P63145 666 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 MORN1Q5T089 497 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 TMEM57Q8N5G2 664 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 C1orf115Q9H7X2 142 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 GPR108Q9NPR9 543 aa10.59□□□□□ -0.71
CLPX-205ENST00000559218 TLR7Q9NYK1 1049 aaKnown RBP10.59□□□□□ -0.71
CLPX-205ENST00000559218 CNMDO75829 334 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 CYP7A1P22680 504 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 OS9Q13438 667 aaPredicted RBP10.58□□□□□ -0.72
CLPX-205ENST00000559218 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 ZYXQ15942 572 aaKnown RBP10.58□□□□□ -0.72
CLPX-205ENST00000559218 GPR142Q7Z601 462 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 PLEKHH3Q7Z736 793 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 DEFB123Q8N688 67 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 MIGA1Q8NAN2 632 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 SSH3Q8TE77 659 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 FAM212AQ96EL1 285 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 DBNLQ9UJU6 430 aaKnown RBP10.58□□□□□ -0.72
CLPX-205ENST00000559218 NDUFB9Q9Y6M9 179 aa10.58□□□□□ -0.72
CLPX-205ENST00000559218 DDX60LQ5H9U9 1706 aaKnown RBP10.58□□□□□ -0.72
CLPX-205ENST00000559218 SURF6O75683 361 aaKnown RBP10.57□□□□□ -0.72
CLPX-205ENST00000559218 RGS2P41220 211 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 ATP8B2P98198 1209 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 LRRC26Q2I0M4 334 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 LRIT3Q3SXY7 679 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 USP17L2Q6R6M4 530 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
CLPX-205ENST00000559218 TDHQ8IZJ6 230 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 ZNF512BQ96KM6 892 aaPredicted RBP10.57□□□□□ -0.72
CLPX-205ENST00000559218 APBA2Q99767 749 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 UBE2OQ9C0C9 1292 aaKnown RBP10.57□□□□□ -0.72
CLPX-205ENST00000559218 CCDC8Q9H0W5 538 aaPredicted RBP10.57□□□□□ -0.72
CLPX-205ENST00000559218 GINM1Q9NU53 330 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 FLRT1Q9NZU1 646 aa10.57□□□□□ -0.72
CLPX-205ENST00000559218 VCANP13611 3396 aa10.56□□□□□ -0.72
CLPX-205ENST00000559218 IDH1O75874 414 aaKnown RBP10.56□□□□□ -0.72
CLPX-205ENST00000559218 HLA-DOAP06340 250 aa10.56□□□□□ -0.72
CLPX-205ENST00000559218 C7P10643 843 aa10.56□□□□□ -0.72
CLPX-205ENST00000559218 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
CLPX-205ENST00000559218 TATDN1Q6P1N9 297 aa10.56□□□□□ -0.72
CLPX-205ENST00000559218 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
CLPX-205ENST00000559218 RASEFQ8IZ41 740 aa10.56□□□□□ -0.72
CLPX-205ENST00000559218 ACER1Q8TDN7 264 aa10.56□□□□□ -0.72
CLPX-205ENST00000559218 EAF2Q96CJ1 260 aaPredicted RBP10.56□□□□□ -0.72
CLPX-205ENST00000559218 FEZ1Q99689 392 aa10.56□□□□□ -0.72
CLPX-205ENST00000559218 MAST2Q6P0Q8 1798 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L15C9J2P7 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L13C9JLJ4 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L11C9JVI0 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L18D6R9N7 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L22D6RA61 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L17D6RBQ6 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L19D6RCP7 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L20D6RJB6 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 VCAM1P19320 739 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP5P45974 858 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 MDM2Q00987 491 aaPredicted RBP10.55□□□□□ -0.72
CLPX-205ENST00000559218 USP17L24Q0WX57 530 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 MAP2K5Q13163 448 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 RAB3GAP1Q15042 981 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 WDR78Q5VTH9 848 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 ZKSCAN2Q63HK3 967 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 MAGEB6Q8N7X4 407 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 GTF3C2Q8WUA4 911 aaPredicted RBP10.55□□□□□ -0.72
CLPX-205ENST00000559218 C12orf42Q96LP6 360 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 ANTXR1Q9H6X2 564 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
CLPX-205ENST00000559218 MTMR10Q9NXD2 777 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 BTBD7Q9P203 1132 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 NOP58Q9Y2X3 529 aaKnown RBP10.55□□□□□ -0.72
CLPX-205ENST00000559218 RABGAP1Q9Y3P9 1069 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 EYSQ5T1H1 3165 aa10.55□□□□□ -0.72
CLPX-205ENST00000559218 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 RLBP1P12271 317 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 SHMT1P34896 483 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 ABCB5Q2M3G0 1257 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 CERKLQ49MI3 558 aaPredicted RBP10.54□□□□□ -0.72
CLPX-205ENST00000559218 CATSPERGQ6ZRH7 1159 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 TRPV1Q8NER1 839 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 EDC3Q96F86 508 aaKnown RBP10.54□□□□□ -0.72
CLPX-205ENST00000559218 KIAA1683Q9H0B3 1180 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 EHD4Q9H223 541 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 SERPINB13Q9UIV8 391 aa10.54□□□□□ -0.72
CLPX-205ENST00000559218 TTC28Q96AY4 2481 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 SLC15A5A6NIM6 579 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 CCER2I3L3R5 266 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
CLPX-205ENST00000559218 PTPREP23469 700 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 CYP2C19P33261 490 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 GUCY1A2P33402 732 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 PLCD1P51178 756 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 CCNA1P78396 465 aa10.53□□□□□ -0.72
CLPX-205ENST00000559218 MFSD14CQ5VZR4 134 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms