RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 AKR1B1P15121 316 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 CDK8P49336 464 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 KIF22Q14807 665 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 PKN2Q16513 984 aaKnown RBP13.18□□□□□ -0.3
PBX1-213ENST00000558796 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
PBX1-213ENST00000558796 C16orf86Q6ZW13 317 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 ACER1Q8TDN7 264 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 HPS5Q9UPZ3 1129 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 BRCA2P51587 3418 aa13.18□□□□□ -0.3
PBX1-213ENST00000558796 C19orf81C9J6K1 198 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 BCRP11274 1271 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 PDE4AP27815 886 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 CTGFP29279 349 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 USP17L2Q6R6M4 530 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 FAM227BQ96M60 508 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 ASCC2Q9H1I8 757 aaPredicted RBP13.17□□□□□ -0.3
PBX1-213ENST00000558796 OSBPL3Q9H4L5 887 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
PBX1-213ENST00000558796 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
PBX1-213ENST00000558796 OSBPP22059 807 aa13.16□□□□□ -0.3
PBX1-213ENST00000558796 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
PBX1-213ENST00000558796 NMIQ13287 307 aaPredicted RBP13.16□□□□□ -0.3
PBX1-213ENST00000558796 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
PBX1-213ENST00000558796 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
PBX1-213ENST00000558796 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
PBX1-213ENST00000558796 IFNL3Q8IZI9 196 aa13.16□□□□□ -0.3
PBX1-213ENST00000558796 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
PBX1-213ENST00000558796 NACAP1Q9BZK3 213 aa13.16□□□□□ -0.3
PBX1-213ENST00000558796 PTPN22Q9Y2R2 807 aa13.16□□□□□ -0.3
PBX1-213ENST00000558796 FOXP2O15409 715 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 PSMC4P43686 418 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 ICA1Q05084 483 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 TRIM47Q96LD4 638 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 NAPBQ9H115 298 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
PBX1-213ENST00000558796 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
PBX1-213ENST00000558796 A0A1W2PRG0 241 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 PEX10O60683 326 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 PRDM1O75626 825 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
PBX1-213ENST00000558796 VCAM1P19320 739 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 RASA1P20936 1047 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 USP14P54578 494 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 SOX10P56693 466 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
PBX1-213ENST00000558796 C12orf42Q96LP6 360 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 CCDC17Q96LX7 622 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 HELLSQ9NRZ9 838 aa13.14□□□□□ -0.31
PBX1-213ENST00000558796 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
PBX1-213ENST00000558796 SDSP20132 328 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 HOXA7P31268 230 aaPredicted RBP13.13□□□□□ -0.31
PBX1-213ENST00000558796 GCLCP48506 637 aaPredicted RBP13.13□□□□□ -0.31
PBX1-213ENST00000558796 FCGRTP55899 365 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 HERVK_113P62684 666 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 PPARAQ07869 468 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 FAM110CQ1W6H9 321 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 MCMDC2Q4G0Z9 681 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 TTC22Q5TAA0 569 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 P2RX7Q99572 595 aaKnown RBP13.13□□□□□ -0.31
PBX1-213ENST00000558796 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 ARHGEF10LQ9HCE6 1279 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 DIAPH3Q9NSV4 1193 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
PBX1-213ENST00000558796 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
PBX1-213ENST00000558796 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
PBX1-213ENST00000558796 KIAA1755Q5JYT7 1200 aa13.12□□□□□ -0.31
PBX1-213ENST00000558796 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
PBX1-213ENST00000558796 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
PBX1-213ENST00000558796 PLXNA1Q9UIW2 1896 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L17D6RBQ6 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L19D6RCP7 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L20D6RJB6 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
PBX1-213ENST00000558796 GNRH1P01148 92 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 EEF2P13639 858 aaKnown RBP13.11□□□□□ -0.31
PBX1-213ENST00000558796 PRKCZQ05513 592 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 USP17L24Q0WX57 530 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 SLC9C1Q4G0N8 1177 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 CWC27Q6UX04 472 aaKnown RBP13.11□□□□□ -0.31
PBX1-213ENST00000558796 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 PAGR1Q9BTK6 254 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
PBX1-213ENST00000558796 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 TXNRD2Q9NNW7 524 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms