RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 MAGEC2Q9UBF1 373 aaPredicted RBP1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 PCDHB14Q9Y5E9 798 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 TRBV23OR9-2A0A075B6M9 112 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 KLRG2A4D1S0 409 aaPredicted RBP1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 PPM1BO75688 479 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 CPB1P15086 417 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 CD33P20138 364 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 POU3F2P20265 443 aaPredicted RBP1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 TRIM28Q13263 835 aaKnown RBP1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 MAP3K11Q16584 847 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 ANKRD39Q53RE8 183 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 ARTNQ5T4W7 220 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 MEI1Q5TIA1 1274 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 FBXO11Q86XK2 927 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 ANKLE2Q86XL3 938 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 SMG8Q8ND04 991 aaKnown RBP1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 SYTL4Q96C24 671 aaPredicted RBP1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 PIDD1Q9HB75 910 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 SSU72Q9NP77 194 aaKnown RBP1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 RNF112Q9ULX5 631 aa1.85□□□□□ -2.11
CTDSPL2-202ENST00000558373 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 DCDC2BA2VCK2 349 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 A6NHS1 94 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 C9orf172C9J069 976 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 PLD2O14939 933 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 MAFGO15525 162 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 CPP00450 1065 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 RAG1P15918 1043 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 NRG1Q02297 640 aaPredicted RBP1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 TBC1D8BQ0IIM8 1120 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 ZNF252P-AS1Q0IIN9 211 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 MTERF2Q49AM1 385 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 MSL1Q68DK7 614 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 FBXL19Q6PCT2 694 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 PODNQ7Z5L7 613 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 CHAC2Q8WUX2 184 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 SLC30A3Q99726 388 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 ZFYVE21Q9BQ24 234 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 ZNF408Q9H9D4 720 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 GOLGA2P5Q9HBQ8 144 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 INTS7Q9NVH2 962 aaKnown RBP1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 ZFATQ9P243 1243 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 SUSD2Q9UGT4 822 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 KMT2BQ9UMN6 2715 aaPredicted RBP1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 ZBTB42B2RXF5 422 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 CYP2E1P05181 493 aaPredicted RBP1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 RASA3Q14644 834 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 CYFIP1Q7L576 1253 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 PASD1Q8IV76 773 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 RNF214Q8ND24 703 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 SHDQ96IW2 340 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 POP1Q99575 1024 aaKnown RBP1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 SSBP4Q9BWG4 385 aaPredicted RBP1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 RNF208Q9H0X6 261 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 CNNM2Q9H8M5 875 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 TMEM260Q9NX78 707 aa1.84□□□□□ -2.11
CTDSPL2-202ENST00000558373 GPR25O00155 361 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 SART1O43290 800 aaKnown RBP1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 DDAH1O94760 285 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 F13A1P00488 732 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 NME1P15531 152 aaKnown RBP1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 PLCG1P19174 1290 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 KIR3DL1P43629 444 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 OCRLQ01968 901 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 BMS1Q14692 1282 aaKnown RBP1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 SPRED3Q2MJR0 410 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 PERM1Q5SV97 790 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 HEATR6Q6AI08 1181 aaKnown RBP1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 KISS1RQ969F8 398 aaPredicted RBP1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 RUSC1Q9BVN2 902 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 KRTAP4-5Q9BYR2 181 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 BRMS1Q9HCU9 246 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 COPRSQ9NQ92 184 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 SNTG2Q9NY99 539 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 MAPRE3Q9UPY8 281 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 TMEM131LA2VDJ0 1609 aa1.84□□□□□ -2.12
CTDSPL2-202ENST00000558373 CDC14CA4D256 554 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 ENC1O14682 589 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 RGS13O14921 159 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 FSCN2O14926 492 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 ITGA4P13612 1032 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 CD68P34810 354 aaPredicted RBP1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 GRIA4P48058 902 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 PMS1P54277 932 aaKnown RBP1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 FAM160A1Q05DH4 1040 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 GRB10Q13322 594 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 CPSF6Q16630 551 aaKnown RBP eCLIP1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 NLRC3Q7RTR2 1065 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 MRPL41Q8IXM3 137 aaKnown RBP1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 PPM1KQ8N3J5 372 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 RNF169Q8NCN4 708 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 NSUN5Q96P11 429 aaKnown RBP1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 CDC6Q99741 560 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 FOXQ1Q9C009 403 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 ALG13Q9NP73 1137 aaKnown RBP1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 LRP2BPQ9P2M1 347 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 GTF2IRD1Q9UHL9 959 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 GSTA4O15217 222 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 CYP27A1Q02318 531 aa1.83□□□□□ -2.12
CTDSPL2-202ENST00000558373 OS9Q13438 667 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms