RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 BRAPQ7Z569 592 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 ABTB1Q969K4 478 aaPredicted RBP15.46■□□□□ 0.07
SPG11-210ENST00000558319 RAB3IPQ96QF0 476 aaPredicted RBP15.46■□□□□ 0.07
SPG11-210ENST00000558319 MRPL46Q9H2W6 279 aaKnown RBP15.46■□□□□ 0.07
SPG11-210ENST00000558319 DDX41Q9UJV9 622 aaKnown RBP15.46■□□□□ 0.07
SPG11-210ENST00000558319 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.07
SPG11-210ENST00000558319 CCDC105Q8IYK2 499 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 UBL4BQ8N7F7 174 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 CSRNP2Q9H175 543 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 BZW2Q9Y6E2 419 aaKnown RBP15.46■□□□□ 0.07
SPG11-210ENST00000558319 IVNS1ABPQ9Y6Y0 642 aa15.46■□□□□ 0.07
SPG11-210ENST00000558319 E2F5Q15329 346 aa15.46■□□□□ 0.06
SPG11-210ENST00000558319 KIF14Q15058 1648 aa15.46■□□□□ 0.06
SPG11-210ENST00000558319 FAM182BQ5T319 152 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 STX2P32856 288 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 ITKQ08881 620 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 TTC30BQ8N4P2 665 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 ANKRD44Q8N8A2 993 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 XAGE2Q96GT9 111 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 APOL6Q9BWW8 343 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 VPS37BQ9H9H4 285 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 CD19P15391 556 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 TPH2Q8IWU9 490 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 UHMK1Q8TAS1 419 aaKnown RBP15.45■□□□□ 0.06
SPG11-210ENST00000558319 ST7Q9NRC1 585 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 PPME1Q9Y570 386 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 DPP8Q6V1X1 898 aaPredicted RBP15.45■□□□□ 0.06
SPG11-210ENST00000558319 APBA3O96018 575 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 GADL1Q6ZQY3 521 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 LGR6Q9HBX8 967 aa15.45■□□□□ 0.06
SPG11-210ENST00000558319 GNA11P29992 359 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 CSGALNACT2Q8N6G5 542 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 PLCB1Q9NQ66 1216 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 ABCF3Q9NUQ8 709 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 ARHGEF35A5YM69 484 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 HIP1RO75146 1068 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 CTNNA1P35221 906 aaKnown RBP15.44■□□□□ 0.06
SPG11-210ENST00000558319 SNCBQ16143 134 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 GPR162Q16538 588 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 KMT5BQ4FZB7 885 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 EDC3Q96F86 508 aaKnown RBP15.44■□□□□ 0.06
SPG11-210ENST00000558319 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 SCYL2Q6P3W7 929 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 BCAS4Q8TDM0 211 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 CAPS2Q9BXY5 557 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 GGA1Q9UJY5 639 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 RNMTO43148 476 aaKnown RBP15.44■□□□□ 0.06
SPG11-210ENST00000558319 CCT5P48643 541 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 TESPA1A2RU30 521 aaPredicted RBP15.44■□□□□ 0.06
SPG11-210ENST00000558319 TUBB2AQ13885 445 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 MSANTD4Q8NCY6 345 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 EYA1Q99502 592 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 TUBB2BQ9BVA1 445 aa15.44■□□□□ 0.06
SPG11-210ENST00000558319 RGS16O15492 202 aaPredicted RBP15.43■□□□□ 0.06
SPG11-210ENST00000558319 CUL4BQ13620 913 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 TRIM14Q14142 442 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 NXNQ6DKJ4 435 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 TYW1BQ6NUM6 668 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 MRPL44Q9H9J2 332 aaKnown RBP15.43■□□□□ 0.06
SPG11-210ENST00000558319 KCNH3Q9ULD8 1083 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 MGEA5O60502 916 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 FAM102BQ5T8I3 360 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 KIFAP3Q92845 792 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 EYA3Q99504 573 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 DESI2Q9BSY9 194 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 BEGAINQ9BUH8 593 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 STK32BQ9NY57 414 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 SLC4A1P02730 911 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 STMN1P16949 149 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 KCNQ4P56696 695 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 SMCR8Q8TEV9 937 aaPredicted RBP15.43■□□□□ 0.06
SPG11-210ENST00000558319 SPATA17Q96L03 361 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 A6NNZ2 444 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 PTPN21Q16825 1174 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 TUBB8Q3ZCM7 444 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 DHX32Q7L7V1 743 aaKnown RBP15.43■□□□□ 0.06
SPG11-210ENST00000558319 CTTNBP2NLQ9P2B4 639 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.43■□□□□ 0.06
SPG11-210ENST00000558319 RASSF2P50749 326 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 CFAP221Q4G0U5 840 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 PRPF6O94906 941 aaKnown RBP15.43■□□□□ 0.06
SPG11-210ENST00000558319 GOLGA8HP0CJ92 632 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 CHMLP26374 656 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 NLRP12P59046 1061 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 UBXN2AP68543 259 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 PAK1Q13153 545 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 PLEKHM2Q8IWE5 1019 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 EEF2KMTQ96G04 330 aa15.43■□□□□ 0.06
SPG11-210ENST00000558319 INTS4Q96HW7 963 aaKnown RBP15.43■□□□□ 0.06
SPG11-210ENST00000558319 SLC9C1Q4G0N8 1177 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 EFCC1Q9HA90 598 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 ARHGEF10LQ9HCE6 1279 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 VPS54Q9P1Q0 977 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 IFT140Q96RY7 1462 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 RNF40O75150 1001 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 MAGEA1P43355 309 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 VPS41P49754 854 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 PPP2R5AQ15172 486 aa15.42■□□□□ 0.06
SPG11-210ENST00000558319 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms