RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 GNAT3A8MTJ3 354 aa5.81□□□□□ -1.48
LRRC28-205ENST00000558248 LEFTY1O75610 366 aa5.81□□□□□ -1.48
LRRC28-205ENST00000558248 RAPGEF3O95398 923 aa5.81□□□□□ -1.48
LRRC28-205ENST00000558248 ZNF16P17020 682 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-205ENST00000558248 TFE3P19532 575 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-205ENST00000558248 TAGLNQ01995 201 aaKnown RBP5.81□□□□□ -1.48
LRRC28-205ENST00000558248 IFI16Q16666 785 aaKnown RBP5.81□□□□□ -1.48
LRRC28-205ENST00000558248 ZNF746Q6NUN9 644 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-205ENST00000558248 FAM181AQ8N9Y4 354 aa5.81□□□□□ -1.48
LRRC28-205ENST00000558248 PHC3Q8NDX5 983 aa5.81□□□□□ -1.48
LRRC28-205ENST00000558248 JARID2Q92833 1246 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-205ENST00000558248 PRDM5Q9NQX1 630 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-205ENST00000558248 OAS3Q9Y6K5 1087 aaKnown RBP5.81□□□□□ -1.48
LRRC28-205ENST00000558248 MADDQ8WXG6 1647 aa5.81□□□□□ -1.48
LRRC28-205ENST00000558248 TMEM265A0A087WTH1 108 aa5.8□□□□□ -1.48
LRRC28-205ENST00000558248 CEACAM5P06731 702 aa5.8□□□□□ -1.48
LRRC28-205ENST00000558248 ITIH2P19823 946 aa5.8□□□□□ -1.48
LRRC28-205ENST00000558248 GRK4P32298 578 aa5.8□□□□□ -1.48
LRRC28-205ENST00000558248 GBP2P32456 591 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-205ENST00000558248 RPL6Q02878 288 aaKnown RBP5.8□□□□□ -1.48
LRRC28-205ENST00000558248 MFSD2AQ8NA29 543 aa5.8□□□□□ -1.48
LRRC28-205ENST00000558248 FOXQ1Q9C009 403 aa5.8□□□□□ -1.48
LRRC28-205ENST00000558248 TLR6Q9Y2C9 796 aa5.8□□□□□ -1.48
LRRC28-205ENST00000558248 CARMIL2Q6F5E8 1435 aa5.8□□□□□ -1.48
LRRC28-205ENST00000558248 BCORL1Q5H9F3 1711 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 IGF2BP3O00425 579 aaKnown RBP eCLIP5.79□□□□□ -1.48
LRRC28-205ENST00000558248 ADAMTS4O75173 837 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 PGRP06401 933 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 CAP2P40123 477 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 LMNB2Q03252 620 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 SNAP47Q5SQN1 464 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 PLD6Q8N2A8 252 aaKnown RBP5.79□□□□□ -1.48
LRRC28-205ENST00000558248 HRASLS5Q96KN8 279 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 TMEM74Q96NL1 305 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 MIPEPQ99797 713 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 RSRP1Q9BUV0 290 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 TPX2Q9ULW0 747 aaKnown RBP5.79□□□□□ -1.48
LRRC28-205ENST00000558248 MAPK8IP1Q9UQF2 711 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 ARAP3Q8WWN8 1544 aa5.79□□□□□ -1.48
LRRC28-205ENST00000558248 WDR7Q9Y4E6 1490 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 ZCCHC11Q5TAX3 1644 aaKnown RBP5.78□□□□□ -1.48
LRRC28-205ENST00000558248 GFRA2O00451 464 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 CYP7A1P22680 504 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 VAMP1P23763 118 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 OXCT1P55809 520 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 CAMK2GQ13555 558 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-205ENST00000558248 UBE3DQ7Z6J8 389 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 BCL7CQ8WUZ0 217 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-205ENST00000558248 UBE2Q2Q8WVN8 375 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 FBRSQ9HAH7 460 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 VAV3Q9UKW4 847 aa5.78□□□□□ -1.48
LRRC28-205ENST00000558248 RIMS1Q86UR5 1692 aaKnown RBP5.78□□□□□ -1.48
LRRC28-205ENST00000558248 YEATS2Q9ULM3 1422 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 ANKRD62A6NC57 917 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-205ENST00000558248 FAM155AB1AL88 458 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-205ENST00000558248 F6X3S4 739 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 CST3P01034 146 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-205ENST00000558248 PF4P02776 101 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 CDK8P49336 464 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 PRKCQQ04759 706 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 SLBPQ14493 270 aaKnown RBP eCLIP5.77□□□□□ -1.49
LRRC28-205ENST00000558248 PLCL1Q15111 1095 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 PRAMEF13Q5VWM6 474 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 MCTP1Q6DN14 999 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 HS2ST1Q7LGA3 356 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 ABI1Q8IZP0 508 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 GATAD2BQ8WXI9 593 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 COX4I2Q96KJ9 171 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 ADAM30Q9UKF2 790 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 SNX11Q9Y5W9 270 aa5.77□□□□□ -1.49
LRRC28-205ENST00000558248 MINDY4BA8MYZ0 360 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 SLITRK5O94991 958 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 CLCN7P51798 805 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 NKG7Q16617 165 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 AOC3Q16853 763 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 SFRP5Q5T4F7 317 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 SLC6A19Q695T7 634 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 LETMD1Q6P1Q0 360 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 BNC2Q6ZN30 1099 aaPredicted RBP5.76□□□□□ -1.49
LRRC28-205ENST00000558248 MRPL41Q8IXM3 137 aaKnown RBP5.76□□□□□ -1.49
LRRC28-205ENST00000558248 FAM9AQ8IZU1 332 aaPredicted RBP5.76□□□□□ -1.49
LRRC28-205ENST00000558248 GOLM1Q8NBJ4 401 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 ASB11Q8WXH4 323 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 TMEM87BQ96K49 555 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 RHOVQ96L33 236 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 HEXIM2Q96MH2 286 aaKnown RBP5.76□□□□□ -1.49
LRRC28-205ENST00000558248 HIRIP3Q9BW71 556 aaPredicted RBP5.76□□□□□ -1.49
LRRC28-205ENST00000558248 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 PAK6Q9NQU5 681 aaPredicted RBP5.76□□□□□ -1.49
LRRC28-205ENST00000558248 BIVM-ERCC5R4GMW8 1640 aa5.76□□□□□ -1.49
LRRC28-205ENST00000558248 CFAP43Q8NDM7 1665 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 PAX4O43316 350 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 CILPO75339 1184 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 EOMESO95936 686 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 F13A1P00488 732 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 PLCG1P19174 1290 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 ETV3P41162 512 aa5.75□□□□□ -1.49
LRRC28-205ENST00000558248 CEBPAP49715 358 aaPredicted RBP5.75□□□□□ -1.49
LRRC28-205ENST00000558248 YARSP54577 528 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms