RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 CAP2P40123 477 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 TCP10Q12799 353 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-213ENST00000557765 SAMD7Q7Z3H4 446 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 USP48Q86UV5 1035 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 SMARCC2Q8TAQ2 1214 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 LPAR1Q92633 364 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 MAF1Q9H063 256 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 AS3MTQ9HBK9 375 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 MYH8P13535 1937 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 GREB1LQ9C091 1923 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-213ENST00000557765 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 PLA2G6O60733 806 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
GABRB3-213ENST00000557765 FDX1P10109 184 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 DDIT3P35638 169 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 EPS15P42566 896 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 USP14P54578 494 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 RTN1Q16799 776 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 NOL9Q5SY16 702 aaKnown RBP12.24□□□□□ -0.45
GABRB3-213ENST00000557765 ANGEL2Q5VTE6 544 aaKnown RBP12.24□□□□□ -0.45
GABRB3-213ENST00000557765 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
GABRB3-213ENST00000557765 DCAF4Q8WV16 495 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
GABRB3-213ENST00000557765 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
GABRB3-213ENST00000557765 GGA3Q9NZ52 723 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 STX8Q9UNK0 236 aa12.24□□□□□ -0.45
GABRB3-213ENST00000557765 CYP2D7A0A087X1C5 515 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 PRDM1O75626 825 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 DEXIO95424 95 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 SNHG28P0DPA3 235 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 CYP2D6P10635 497 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 AKAP17AQ02040 695 aaKnown RBP12.23□□□□□ -0.45
GABRB3-213ENST00000557765 APOBRQ0VD83 1088 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 ATL3Q6DD88 541 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 GALNT17Q6IS24 598 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 FAM184AQ8NB25 1140 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 CCDC12Q8WUD4 166 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-213ENST00000557765 DYNLL2Q96FJ2 89 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 GMCL1Q96IK5 515 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 GOPCQ9HD26 462 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 IL17RBQ9NRM6 502 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
GABRB3-213ENST00000557765 C19orf81C9J6K1 198 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 CPA1P15085 419 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
GABRB3-213ENST00000557765 ICA1Q05084 483 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 SCRN1Q12765 414 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 MCTP2Q6DN12 878 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 CEP95Q96GE4 821 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 TMEM47Q9BQJ4 181 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 WDR18Q9BV38 432 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 SPZ1Q9BXG8 430 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 TMEM39BQ9GZU3 492 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 ZSCAN16Q9H4T2 348 aaPredicted RBP12.22□□□□□ -0.45
GABRB3-213ENST00000557765 DNAJC18Q9H819 358 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 SH3GLB2Q9NR46 395 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 TMX2Q9Y320 296 aa12.22□□□□□ -0.45
GABRB3-213ENST00000557765 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
GABRB3-213ENST00000557765 PARP1P09874 1014 aaKnown RBP12.21□□□□□ -0.45
GABRB3-213ENST00000557765 HIRAP54198 1017 aaPredicted RBP12.21□□□□□ -0.45
GABRB3-213ENST00000557765 CACNB3P54284 484 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 SSRP1Q08945 709 aaKnown RBP12.21□□□□□ -0.45
GABRB3-213ENST00000557765 GRM4Q14833 912 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 FAM47AQ5JRC9 791 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 CLEC17AQ6ZS10 378 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 KRT26Q7Z3Y9 468 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 ZFPM1Q8IX07 1006 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 SCYL3Q8IZE3 742 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 NSUN7Q8NE18 718 aaKnown RBP12.21□□□□□ -0.45
GABRB3-213ENST00000557765 TRPM4Q8TD43 1214 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 PICK1Q9NRD5 415 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 ZBTB21Q9ULJ3 1066 aa12.21□□□□□ -0.45
GABRB3-213ENST00000557765 SIPA1L1O43166 1804 aa12.21□□□□□ -0.46
GABRB3-213ENST00000557765 PALM3A6NDB9 673 aaPredicted RBP12.2□□□□□ -0.46
GABRB3-213ENST00000557765 USP17L5A8MUK1 530 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 PHF20L1A8MW92 1017 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 MPHOSPH10O00566 681 aaKnown RBP12.2□□□□□ -0.46
GABRB3-213ENST00000557765 PRPF3O43395 683 aaKnown RBP12.2□□□□□ -0.46
GABRB3-213ENST00000557765 AKR1B1P15121 316 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 TRIM29Q14134 588 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 NTRK3Q16288 839 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 TMTC3Q6ZXV5 915 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 ARMC9Q7Z3E5 817 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 MICU3Q86XE3 530 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 CCDC83Q8IWF9 413 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
GABRB3-213ENST00000557765 KIAA1683Q9H0B3 1180 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 PCDHAC2Q9Y5I4 1007 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
GABRB3-213ENST00000557765 EGFRP00533 1210 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms