RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 C12orf60Q5U649 245 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 CTR9Q6PD62 1173 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 MIGA2Q7L4E1 593 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 IFNL3Q8IZI9 196 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 CLMNQ96JQ2 1002 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 EHD4Q9H223 541 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
CHD8-214ENST00000557727 TACC3Q9Y6A5 838 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 ZMYM6O95789 1325 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 RAD50Q92878 1312 aa10.81□□□□□ -0.68
CHD8-214ENST00000557727 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 USP17L21D6R901 530 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 UBE2Q2LH0YL09 131 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 HIP1O00291 1037 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 GNAT2P19087 354 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 INPP5BP32019 993 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 PRKG1Q13976 671 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 ALX1Q15699 326 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 SHROOM1Q2M3G4 852 aaPredicted RBP10.8□□□□□ -0.68
CHD8-214ENST00000557727 SLC4A8Q2Y0W8 1093 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 DNAJC5GQ8N7S2 189 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 HHIPL1Q96JK4 782 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 DIAPH3Q9NSV4 1193 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 MCM9Q9NXL9 1143 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 PI4KBQ9UBF8 816 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 ANGEL1Q9UNK9 670 aaKnown RBP10.8□□□□□ -0.68
CHD8-214ENST00000557727 SNCAIPQ9Y6H5 919 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 LOC285556D6RIA3 1793 aa10.8□□□□□ -0.68
CHD8-214ENST00000557727 FAM155AB1AL88 458 aaPredicted RBP10.79□□□□□ -0.68
CHD8-214ENST00000557727 SHMT1P34896 483 aa10.79□□□□□ -0.68
CHD8-214ENST00000557727 GJA5P36382 358 aa10.79□□□□□ -0.68
CHD8-214ENST00000557727 PTH1RQ03431 593 aa10.79□□□□□ -0.68
CHD8-214ENST00000557727 VGLL4Q14135 290 aa10.79□□□□□ -0.68
CHD8-214ENST00000557727 NOL9Q5SY16 702 aaKnown RBP10.79□□□□□ -0.68
CHD8-214ENST00000557727 TATDN1Q6P1N9 297 aa10.79□□□□□ -0.68
CHD8-214ENST00000557727 ZSCAN29Q8IWY8 852 aaPredicted RBP10.79□□□□□ -0.68
CHD8-214ENST00000557727 SLC44A5Q8NCS7 719 aa10.79□□□□□ -0.68
CHD8-214ENST00000557727 ESYT1Q9BSJ8 1104 aa10.79□□□□□ -0.68
CHD8-214ENST00000557727 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
CHD8-214ENST00000557727 MYH4Q9Y623 1939 aa10.79□□□□□ -0.68
CHD8-214ENST00000557727 UNCXA6NJT0 531 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 PPP1R12BO60237 982 aaPredicted RBP10.78□□□□□ -0.68
CHD8-214ENST00000557727 FGAP02671 866 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 NF2P35240 595 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 HUNKP57058 714 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 DCAF15Q66K64 600 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 RASAL3Q86YV0 1011 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
CHD8-214ENST00000557727 C2orf69Q8N8R5 385 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 NKX2-3Q8TAU0 364 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 DDX12PQ92771 950 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
CHD8-214ENST00000557727 DYNLL2Q96FJ2 89 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 WRNIP1Q96S55 665 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 ZNF341Q9BYN7 854 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.78□□□□□ -0.68
CHD8-214ENST00000557727 ARPP21Q9UBL0 812 aaPredicted RBP10.78□□□□□ -0.68
CHD8-214ENST00000557727 SERPINB13Q9UIV8 391 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 PARP14Q460N5 1801 aa10.78□□□□□ -0.68
CHD8-214ENST00000557727 CDC45O75419 566 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 SLC10A3P09131 477 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 IREB2P48200 963 aaKnown RBP10.77□□□□□ -0.69
CHD8-214ENST00000557727 RGMBQ6NW40 437 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 C16orf86Q6ZW13 317 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 ARMC9Q7Z3E5 817 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 TTC6Q86TZ1 520 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 HOOK2Q96ED9 719 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 ZIC5Q96T25 663 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 DSCC1Q9BVC3 393 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 LSG1Q9H089 658 aaKnown RBP10.77□□□□□ -0.69
CHD8-214ENST00000557727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHD8-214ENST00000557727 ANAPC4Q9UJX5 808 aa10.77□□□□□ -0.69
CHD8-214ENST00000557727 ABT1Q9ULW3 272 aaKnown RBP10.77□□□□□ -0.69
CHD8-214ENST00000557727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHD8-214ENST00000557727 RLFQ13129 1914 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 SPDYE16A6NNV3 312 aaPredicted RBP10.76□□□□□ -0.69
CHD8-214ENST00000557727 CTNND1O60716 968 aaKnown RBP10.76□□□□□ -0.69
CHD8-214ENST00000557727 POLR3DP05423 398 aaPredicted RBP10.76□□□□□ -0.69
CHD8-214ENST00000557727 HLA-DOAP06340 250 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 FGRP09769 529 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 GUCY1A2P33402 732 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 CAP2P40123 477 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 TDO2P48775 406 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 CDK8P49336 464 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 PPARAQ07869 468 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 CYP4F22Q6NT55 531 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 ANKRD13AQ8IZ07 590 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHD8-214ENST00000557727 INCENPQ9NQS7 918 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 TAF6LQ9Y6J9 622 aa10.76□□□□□ -0.69
CHD8-214ENST00000557727 SPDYE5A6NIY4 337 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 APPP05067 770 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 PTPRAP18433 802 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 RASA1P20936 1047 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 VEGFBP49765 207 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 MFAP1P55081 439 aaKnown RBP10.75□□□□□ -0.69
CHD8-214ENST00000557727 TTLL12Q14166 644 aaPredicted RBP10.75□□□□□ -0.69
CHD8-214ENST00000557727 DEFB115Q30KQ5 88 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 SPRYD7Q5W111 196 aa10.75□□□□□ -0.69
CHD8-214ENST00000557727 CCDC84Q86UT8 332 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms