RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 IFIT3O14879 490 aaKnown RBP16.65■□□□□ 0.26
RIPK3-206ENST00000557624 FGD1P98174 961 aa16.65■□□□□ 0.26
RIPK3-206ENST00000557624 ICA1Q05084 483 aa16.65■□□□□ 0.26
RIPK3-206ENST00000557624 SART3Q15020 963 aaKnown RBP16.65■□□□□ 0.26
RIPK3-206ENST00000557624 NOL9Q5SY16 702 aaKnown RBP16.65■□□□□ 0.26
RIPK3-206ENST00000557624 LDLRAD1Q5T700 205 aa16.65■□□□□ 0.26
RIPK3-206ENST00000557624 ZSCAN10Q96SZ4 725 aaPredicted RBP16.65■□□□□ 0.26
RIPK3-206ENST00000557624 KANSL2Q9H9L4 492 aa16.65■□□□□ 0.26
RIPK3-206ENST00000557624 STX8Q9UNK0 236 aa16.65■□□□□ 0.26
RIPK3-206ENST00000557624 TNKSO95271 1327 aa16.65■□□□□ 0.26
RIPK3-206ENST00000557624 ERICH2A1L162 156 aa16.64■□□□□ 0.25
RIPK3-206ENST00000557624 PTPRAP18433 802 aa16.64■□□□□ 0.25
RIPK3-206ENST00000557624 NEK4P51957 841 aa16.64■□□□□ 0.25
RIPK3-206ENST00000557624 HUNKP57058 714 aa16.64■□□□□ 0.25
RIPK3-206ENST00000557624 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
RIPK3-206ENST00000557624 TMEM67Q5HYA8 995 aa16.64■□□□□ 0.25
RIPK3-206ENST00000557624 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
RIPK3-206ENST00000557624 MTMR4Q9NYA4 1195 aa16.64■□□□□ 0.25
RIPK3-206ENST00000557624 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
RIPK3-206ENST00000557624 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 RABEP1Q15276 862 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 ENAHQ8N8S7 591 aaPredicted RBP16.63■□□□□ 0.25
RIPK3-206ENST00000557624 GINM1Q9NU53 330 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 PDRG1Q9NUG6 133 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 ABT1Q9ULW3 272 aaKnown RBP16.63■□□□□ 0.25
RIPK3-206ENST00000557624 USP17L5A8MUK1 530 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 TTLL1O95922 423 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
RIPK3-206ENST00000557624 Q6ZUG5 572 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 WDR19Q8NEZ3 1342 aa16.63■□□□□ 0.25
RIPK3-206ENST00000557624 SH2B2O14492 632 aaPredicted RBP16.62■□□□□ 0.25
RIPK3-206ENST00000557624 WTAPQ15007 396 aa16.62■□□□□ 0.25
RIPK3-206ENST00000557624 CCDC178Q5BJE1 867 aa16.62■□□□□ 0.25
RIPK3-206ENST00000557624 IFIT1BQ5T764 474 aaKnown RBP16.62■□□□□ 0.25
RIPK3-206ENST00000557624 RCSD1Q6JBY9 416 aa16.62■□□□□ 0.25
RIPK3-206ENST00000557624 SAPCD2Q86UD0 394 aa16.62■□□□□ 0.25
RIPK3-206ENST00000557624 IGDCC4Q8TDY8 1250 aa16.62■□□□□ 0.25
RIPK3-206ENST00000557624 OTUD5Q96G74 571 aa16.62■□□□□ 0.25
RIPK3-206ENST00000557624 SENP2Q9HC62 589 aa16.62■□□□□ 0.25
RIPK3-206ENST00000557624 CLIP2Q9UDT6 1046 aa16.62■□□□□ 0.25
RIPK3-206ENST00000557624 SEC23AQ15436 765 aa16.61■□□□□ 0.25
RIPK3-206ENST00000557624 NFXL1Q6ZNB6 911 aa16.61■□□□□ 0.25
RIPK3-206ENST00000557624 ERO1BQ86YB8 467 aa16.61■□□□□ 0.25
RIPK3-206ENST00000557624 LRRC47Q8N1G4 583 aaKnown RBP16.61■□□□□ 0.25
RIPK3-206ENST00000557624 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
RIPK3-206ENST00000557624 FEZ1Q99689 392 aa16.61■□□□□ 0.25
RIPK3-206ENST00000557624 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
RIPK3-206ENST00000557624 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
RIPK3-206ENST00000557624 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
RIPK3-206ENST00000557624 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 UNCXA6NJT0 531 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 TRIM75PA6NK02 468 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 RAD21O60216 631 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 ECE1P42892 770 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 SPP2Q13103 211 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 ZYXQ15942 572 aaKnown RBP16.6■□□□□ 0.25
RIPK3-206ENST00000557624 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
RIPK3-206ENST00000557624 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 SIAH1Q8IUQ4 282 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 BRF1Q92994 677 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 TTC14Q96N46 770 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 MTA3Q9BTC8 594 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 AS3MTQ9HBK9 375 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 TLL2Q9Y6L7 1015 aa16.6■□□□□ 0.25
RIPK3-206ENST00000557624 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 APLP1P51693 650 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 ZNF280CQ8ND82 737 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 TMEM47Q9BQJ4 181 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 LARP6Q9BRS8 491 aaKnown RBP16.59■□□□□ 0.25
RIPK3-206ENST00000557624 KAT14Q9H8E8 782 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 MTMR7Q9Y216 660 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 TOP1P11387 765 aaKnown RBP16.59■□□□□ 0.25
RIPK3-206ENST00000557624 ZNF157P51786 506 aaPredicted RBP16.59■□□□□ 0.25
RIPK3-206ENST00000557624 AK2P54819 239 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 PPATQ06203 517 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 MKRN3Q13064 507 aaKnown RBP16.59■□□□□ 0.25
RIPK3-206ENST00000557624 MTMR2Q13614 643 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 TOB2Q14106 344 aaPredicted RBP16.59■□□□□ 0.25
RIPK3-206ENST00000557624 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
RIPK3-206ENST00000557624 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
RIPK3-206ENST00000557624 CCDC69A6NI79 296 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 IRF6O14896 467 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 ST18O60284 1047 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 LIFRP42702 1097 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 NOVP48745 357 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 APOBRQ0VD83 1088 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 PAXIP1Q6ZW49 1069 aaPredicted RBP16.58■□□□□ 0.24
RIPK3-206ENST00000557624 PNMA1Q8ND90 353 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 WDR18Q9BV38 432 aa16.58■□□□□ 0.24
RIPK3-206ENST00000557624 SH2D4AQ9H788 454 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms