RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 IL27Q8NEV9 243 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 NECAB3Q96P71 396 aaPredicted RBP12.89□□□□□ -0.35
TRAV33-201ENST00000557514 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 GINM1Q9NU53 330 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 CEP126Q9P2H0 1117 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
TRAV33-201ENST00000557514 RLFQ13129 1914 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 LRRC41Q15345 812 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 WDR78Q5VTH9 848 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 ANO1Q5XXA6 986 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 FERMT2Q96AC1 680 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 PBX4Q9BYU1 374 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 SIL1Q9H173 461 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 PHF24Q9UPV7 400 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 IVNS1ABPQ9Y6Y0 642 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 MYH13Q9UKX3 1938 aa12.88□□□□□ -0.35
TRAV33-201ENST00000557514 RAG1P15918 1043 aa12.87□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L2Q6R6M4 530 aa12.87□□□□□ -0.35
TRAV33-201ENST00000557514 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
TRAV33-201ENST00000557514 NSUN4Q96CB9 384 aaKnown RBP12.87□□□□□ -0.35
TRAV33-201ENST00000557514 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
TRAV33-201ENST00000557514 CXXC1Q9P0U4 656 aaPredicted RBP12.87□□□□□ -0.35
TRAV33-201ENST00000557514 BTBD7Q9P203 1132 aa12.87□□□□□ -0.35
TRAV33-201ENST00000557514 ROBO3Q96MS0 1386 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L15C9J2P7 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L13C9JLJ4 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L11C9JVI0 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L18D6R9N7 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L22D6RA61 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L17D6RBQ6 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L19D6RCP7 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L20D6RJB6 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 GDF11O95390 407 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 PBX2P40425 430 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 IL15P40933 162 aaPredicted RBP12.86□□□□□ -0.35
TRAV33-201ENST00000557514 GSTO1P78417 241 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 USP17L24Q0WX57 530 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 RASIP1Q5U651 963 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 TEX11Q8IYF3 940 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
TRAV33-201ENST00000557514 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
TRAV33-201ENST00000557514 PQBP1O60828 265 aaKnown RBP12.85□□□□□ -0.35
TRAV33-201ENST00000557514 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
TRAV33-201ENST00000557514 BMP1P13497 986 aa12.85□□□□□ -0.35
TRAV33-201ENST00000557514 VCAM1P19320 739 aa12.85□□□□□ -0.35
TRAV33-201ENST00000557514 ADORA2AP29274 412 aa12.85□□□□□ -0.35
TRAV33-201ENST00000557514 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAV33-201ENST00000557514 MYH2Q9UKX2 1941 aa12.85□□□□□ -0.35
TRAV33-201ENST00000557514 ATAD5Q96QE3 1844 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 ZNF236Q9UL36 1845 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 LDHCP07864 332 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 ANKRD33Q7Z3H0 272 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
TRAV33-201ENST00000557514 TMEM39AQ9NV64 488 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 TBX21Q9UL17 535 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 PTPRCP08575 1304 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 FLT1P17948 1338 aa12.84□□□□□ -0.35
TRAV33-201ENST00000557514 SIPA1L1O43166 1804 aa12.83□□□□□ -0.35
TRAV33-201ENST00000557514 A0A1W2PQ45 241 aaPredicted RBP12.83□□□□□ -0.36
TRAV33-201ENST00000557514 A0A1W2PQY0 241 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 GRXCR1A8MXD5 290 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 FAAP100Q0VG06 881 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
TRAV33-201ENST00000557514 CCDC85BQ15834 202 aaPredicted RBP12.83□□□□□ -0.36
TRAV33-201ENST00000557514 PI16Q6UXB8 463 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 FOXP4Q8IVH2 680 aaPredicted RBP12.83□□□□□ -0.36
TRAV33-201ENST00000557514 TOX2Q96NM4 488 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 FEZ1Q99689 392 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 KIAA1683Q9H0B3 1180 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 HMG20BQ9P0W2 317 aa12.83□□□□□ -0.36
TRAV33-201ENST00000557514 STRNO43815 780 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 COBLO75128 1261 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 GH2P01242 217 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 USP14P54578 494 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 ZYXQ15942 572 aaKnown RBP12.82□□□□□ -0.36
TRAV33-201ENST00000557514 TMEM31Q5JXX7 168 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 C16orf59Q7L2K0 433 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
TRAV33-201ENST00000557514 SLC44A5Q8NCS7 719 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 MOV10L1Q9BXT6 1211 aaKnown RBP12.82□□□□□ -0.36
TRAV33-201ENST00000557514 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 XPNPEP3Q9NQH7 507 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 NRBP1Q9UHY1 535 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 PA2G4Q9UQ80 394 aaKnown RBP12.82□□□□□ -0.36
TRAV33-201ENST00000557514 TRANK1O15050 2925 aa12.82□□□□□ -0.36
TRAV33-201ENST00000557514 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 TIMP1P01033 207 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 RARBP10826 455 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 IGFBP4P22692 258 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 TIMM10P62072 90 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 TFF2Q03403 129 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 RAB30Q15771 203 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 AAK1Q2M2I8 961 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 CCDC184Q52MB2 194 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms