RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 MINPP1Q9UNW1 487 aa20.24■□□□□ 0.83
XRCC3-218ENST00000557439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.24■□□□□ 0.831e-6■□□□□ 8.1
XRCC3-218ENST00000557439 ZNF804BA4D1E1 1349 aa20.24■□□□□ 0.83
XRCC3-218ENST00000557439 TRIM75PA6NK02 468 aa20.24■□□□□ 0.83
XRCC3-218ENST00000557439 URI1O94763 535 aaPredicted RBP20.24■□□□□ 0.83
XRCC3-218ENST00000557439 MTF1Q14872 753 aa20.24■□□□□ 0.83
XRCC3-218ENST00000557439 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
XRCC3-218ENST00000557439 TC2NQ8N9U0 490 aa20.24■□□□□ 0.83
XRCC3-218ENST00000557439 CDC5LQ99459 802 aaKnown RBP20.24■□□□□ 0.83
XRCC3-218ENST00000557439 ZNF446Q9NWS9 450 aa20.24■□□□□ 0.83
XRCC3-218ENST00000557439 MYH13Q9UKX3 1938 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 CACNA1SQ13698 1873 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 VWA3AA6NCI4 1184 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 NUTM2BA6NNL0 878 aaPredicted RBP20.23■□□□□ 0.83
XRCC3-218ENST00000557439 NUTM2EB1AL46 878 aaPredicted RBP20.23■□□□□ 0.83
XRCC3-218ENST00000557439 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
XRCC3-218ENST00000557439 PHF20Q9BVI0 1012 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 HOOK1Q9UJC3 728 aaKnown RBP20.23■□□□□ 0.83
XRCC3-218ENST00000557439 PPP2R2CQ9Y2T4 447 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 KDM4FA0A1W2PPD8 638 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 KRT2P35908 639 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 TROAPQ12815 778 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 NT5DC1Q5TFE4 455 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 CPLX3Q8WVH0 158 aa20.23■□□□□ 0.83
XRCC3-218ENST00000557439 KCNJ6P48051 423 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 TBX2Q13207 712 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-218ENST00000557439 NPY5RQ15761 445 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 CATIPQ7Z7H3 387 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 WDR24Q96S15 920 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 BAG1Q99933 345 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-218ENST00000557439 A0A0U1RQJ8 604 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-218ENST00000557439 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
XRCC3-218ENST00000557439 MLKLQ8NB16 471 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 ATRIPQ8WXE1 791 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 ANAPC4Q9UJX5 808 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 SPATA31A1Q5TZJ5 1347 aa20.22■□□□□ 0.83
XRCC3-218ENST00000557439 PRDX5P30044 214 aa20.21■□□□□ 0.83
XRCC3-218ENST00000557439 ENOX1Q8TC92 643 aaKnown RBP20.21■□□□□ 0.83
XRCC3-218ENST00000557439 BLZF1Q9H2G9 400 aa20.21■□□□□ 0.83
XRCC3-218ENST00000557439 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
XRCC3-218ENST00000557439 KARSQ15046 597 aaKnown RBP20.21■□□□□ 0.83
XRCC3-218ENST00000557439 SPECC1LQ69YQ0 1117 aa20.21■□□□□ 0.83
XRCC3-218ENST00000557439 ZNF579Q8NAF0 562 aaKnown RBP20.21■□□□□ 0.83
XRCC3-218ENST00000557439 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
XRCC3-218ENST00000557439 PAGE5Q96GU1 130 aa20.21■□□□□ 0.83
XRCC3-218ENST00000557439 IRX2Q9BZI1 471 aaPredicted RBP20.21■□□□□ 0.83
XRCC3-218ENST00000557439 GNL3LQ9NVN8 582 aaKnown RBP20.21■□□□□ 0.83
XRCC3-218ENST00000557439 DUOX1Q9NRD9 1551 aa20.21■□□□□ 0.83
XRCC3-218ENST00000557439 CDC25AP30304 524 aa20.2■□□□□ 0.82
XRCC3-218ENST00000557439 MECOMQ03112 1051 aa20.2■□□□□ 0.82
XRCC3-218ENST00000557439 DPYDQ12882 1025 aa20.2■□□□□ 0.82
XRCC3-218ENST00000557439 ARHGAP29Q52LW3 1261 aa20.2■□□□□ 0.82
XRCC3-218ENST00000557439 CAVIN4Q5BKX8 364 aa20.2■□□□□ 0.82
XRCC3-218ENST00000557439 CARD6Q9BX69 1037 aa20.2■□□□□ 0.82
XRCC3-218ENST00000557439 CEP131Q9UPN4 1083 aa20.2■□□□□ 0.82
XRCC3-218ENST00000557439 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
XRCC3-218ENST00000557439 PRPF3O43395 683 aaKnown RBP20.19■□□□□ 0.82
XRCC3-218ENST00000557439 PLCD1P51178 756 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 PTGDRQ13258 359 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 TBC1D9BQ66K14 1250 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 TXNRD3Q86VQ6 643 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 ARHGAP6O43182 974 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 PIK3AP1Q6ZUJ8 805 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 SPATA20Q8TB22 786 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
XRCC3-218ENST00000557439 PARP3Q9Y6F1 533 aa20.19■□□□□ 0.82
XRCC3-218ENST00000557439 MORC2Q9Y6X9 1032 aaPredicted RBP20.19■□□□□ 0.82
XRCC3-218ENST00000557439 CNTNAP5Q8WYK1 1306 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 SOWAHDA6NJG2 315 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 GNG11P61952 73 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 UBE4AQ14139 1066 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 TMTC3Q6ZXV5 915 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 NSUN4Q96CB9 384 aaKnown RBP20.18■□□□□ 0.82
XRCC3-218ENST00000557439 XBP1P17861 261 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 MCM7P33993 719 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 NR1I3Q14994 352 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 TTC38Q5R3I4 469 aa20.18■□□□□ 0.82
XRCC3-218ENST00000557439 BSDC1Q9NW68 430 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-218ENST00000557439 CLCN6P51797 869 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 APTXQ7Z2E3 356 aaKnown RBP20.17■□□□□ 0.82
XRCC3-218ENST00000557439 CREBRFQ8IUR6 639 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 TNFRSF25Q93038 417 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 MRPL44Q9H9J2 332 aaKnown RBP20.17■□□□□ 0.82
XRCC3-218ENST00000557439 PHLPP2Q6ZVD8 1323 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 SLFN14P0C7P3 912 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 IL17AQ16552 155 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 ELOA2Q8IYF1 753 aaPredicted RBP20.17■□□□□ 0.82
XRCC3-218ENST00000557439 RASGRP4Q8TDF6 673 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 MTA3Q9BTC8 594 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 DCP1AQ9NPI6 582 aaPredicted RBP20.17■□□□□ 0.82
XRCC3-218ENST00000557439 ZNF652Q9Y2D9 606 aa20.17■□□□□ 0.82
XRCC3-218ENST00000557439 WNK3Q9BYP7 1800 aa20.16■□□□□ 0.82
XRCC3-218ENST00000557439 SYNRGQ9UMZ2 1314 aa20.16■□□□□ 0.82
XRCC3-218ENST00000557439 RCAN1P53805 252 aa20.16■□□□□ 0.82
XRCC3-218ENST00000557439 GPKOWQ92917 476 aaPredicted RBP eCLIP20.16■□□□□ 0.82
XRCC3-218ENST00000557439 DACH1Q9UI36 760 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms