RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PRPF6O94906 941 aaKnown RBP9.71□□□□□ -0.86
SYNE3-205ENST00000557275 BLVRAP53004 296 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 TTC16Q8NEE8 873 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 NOC4LQ9BVI4 516 aaKnown RBP9.71□□□□□ -0.86
SYNE3-205ENST00000557275 RP1L1Q8IWN7 2480 aaPredicted RBP9.71□□□□□ -0.86
SYNE3-205ENST00000557275 F13A1P00488 732 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 MLKLQ8NB16 471 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 GTPBP10A4D1E9 387 aaKnown RBP9.71□□□□□ -0.86
SYNE3-205ENST00000557275 DDX5P17844 614 aaKnown RBP9.71□□□□□ -0.86
SYNE3-205ENST00000557275 RANBP1P43487 201 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 RAPGEF1Q13905 1077 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 C6orf118Q5T5N4 469 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
SYNE3-205ENST00000557275 SLC17A8Q8NDX2 589 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 BOLA2Q9H3K6 86 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 TRPC6Q9Y210 931 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 TYW5A2RUC4 315 aaKnown RBP9.71□□□□□ -0.86
SYNE3-205ENST00000557275 TNFAIP3P21580 790 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 ATG16L1Q676U5 607 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 SYT10Q6XYQ8 523 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 SLC52A1Q9NWF4 448 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 SAR1BQ9Y6B6 198 aa9.71□□□□□ -0.86
SYNE3-205ENST00000557275 PPP1R12AO14974 1030 aaPredicted RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 PYGMP11217 842 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 MED21Q13503 144 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TMTC4Q5T4D3 741 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 APLFQ8IW19 511 aaPredicted RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TSC22D3Q99576 134 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 SESN1Q9Y6P5 492 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 GOLGA8RI6L899 631 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 XRCC6P12956 609 aaKnown RBP eCLIP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 ANGPT1Q15389 498 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 EDEM3Q9BZQ6 932 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 EIF2AK4Q9P2K8 1649 aaKnown RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TTC41PQ6P2S7 1318 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 MICAL3Q7RTP6 2002 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 NCOA2Q15596 1464 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 HARSP12081 509 aaKnown RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 H0YCG3 227 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 EEF1B2P24534 225 aaKnown RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.7□□□□□ -0.862e-6■■■■■ 54.9
SYNE3-205ENST00000557275 KIF9Q9HAQ2 790 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 SYNJ2O15056 1496 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 PPP6R3Q5H9R7 873 aaPredicted RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TBC1D9Q6ZT07 1266 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 MRPS26Q9BYN8 205 aaKnown RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 IFIH1Q9BYX4 1025 aaKnown RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 ANLNQ9NQW6 1124 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 NDE1Q9NXR1 346 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 IL16Q14005 1332 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 PASKQ96RG2 1323 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 SKOR1P84550 965 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 MRPL28Q13084 256 aaKnown RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 BIRC3Q13489 604 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 ARHGEF18Q6ZSZ5 1173 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TRIM6Q9C030 488 aaPredicted RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TRIM45Q9H8W5 580 aaPredicted RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 CLTAP09496 248 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 IFT122Q9HBG6 1241 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 IL1RAPL2Q9NP60 686 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 EFCAB8A8MWE9 144 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TBC1D8BQ0IIM8 1120 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 TTC22Q5TAA0 569 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 CCDC197Q8NCU1 140 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 ANAPC5Q9UJX4 755 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 DCAF17Q5H9S7 520 aaPredicted RBP9.7□□□□□ -0.86
SYNE3-205ENST00000557275 RINT1Q6NUQ1 792 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 AMFRQ9UKV5 643 aa9.7□□□□□ -0.86
SYNE3-205ENST00000557275 FAM81BQ96LP2 452 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 LLPHQ9BRT6 129 aaKnown RBP9.69□□□□□ -0.86
SYNE3-205ENST00000557275 DCDC2Q9UHG0 476 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 KRT87PA6NCN2 255 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 NXNQ6DKJ4 435 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 OTUB1Q96FW1 271 aaPredicted RBP9.69□□□□□ -0.86
SYNE3-205ENST00000557275 MTRQ99707 1265 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 IFNKQ9P0W0 207 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 MCTP2Q6DN12 878 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 DACT1Q9NYF0 836 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 ZNF212Q9UDV6 495 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 GAPVD1Q14C86 1478 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 PPARGP37231 505 aaPredicted RBP9.69□□□□□ -0.86
SYNE3-205ENST00000557275 ANKLE2Q86XL3 938 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 PIP4K2CQ8TBX8 421 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 FANCD2Q9BXW9 1451 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 TEX9Q8N6V9 391 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 LZTS2Q9BRK4 669 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 MYO1AQ9UBC5 1043 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 GOLGA8TH3BQL2 631 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 OAS2P29728 719 aaKnown RBP9.69□□□□□ -0.86
SYNE3-205ENST00000557275 GLE1Q53GS7 698 aaKnown RBP9.69□□□□□ -0.86
SYNE3-205ENST00000557275 TSR2Q969E8 191 aaKnown RBP9.69□□□□□ -0.86
SYNE3-205ENST00000557275 C16orf71Q8IYS4 520 aaPredicted RBP9.69□□□□□ -0.86
SYNE3-205ENST00000557275 HOOK2Q96ED9 719 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 GSNP06396 782 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 CATSPER1Q8NEC5 780 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms