RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RPIAP49247 311 aa10.75□□□□□ -0.69
VRK1-206ENST00000557222 NFIAQ12857 509 aa10.75□□□□□ -0.69
VRK1-206ENST00000557222 DIXDC1Q155Q3 683 aa10.75□□□□□ -0.69
VRK1-206ENST00000557222 SPTY2D1Q68D10 685 aaPredicted RBP10.75□□□□□ -0.69
VRK1-206ENST00000557222 SH3TC2Q8TF17 1288 aa10.75□□□□□ -0.69
VRK1-206ENST00000557222 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
VRK1-206ENST00000557222 TRIM47Q96LD4 638 aa10.75□□□□□ -0.69
VRK1-206ENST00000557222 API5Q9BZZ5 524 aaKnown RBP10.75□□□□□ -0.69
VRK1-206ENST00000557222 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
VRK1-206ENST00000557222 RANBP2P49792 3224 aaKnown RBP10.75□□□□□ -0.69
VRK1-206ENST00000557222 GAKO14976 1311 aa10.75□□□□□ -0.69
VRK1-206ENST00000557222 MYH13Q9UKX3 1938 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 A0A0G2JLL6 359 aaPredicted RBP10.74□□□□□ -0.69
VRK1-206ENST00000557222 PHF20L1A8MW92 1017 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 GJB1P08034 283 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 FDX1P10109 184 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 BCRP11274 1271 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 FXR1P51114 621 aaKnown RBP eCLIP10.74□□□□□ -0.69
VRK1-206ENST00000557222 UBXN2AP68543 259 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 TCP10Q12799 353 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 GPAT2Q6NUI2 795 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 PRRT2Q7Z6L0 340 aaPredicted RBP10.74□□□□□ -0.69
VRK1-206ENST00000557222 SCYL3Q8IZE3 742 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 RAET1EQ8TD07 263 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 PICK1Q9NRD5 415 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 CPA4Q9UI42 421 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 PCDHGC3Q9UN70 934 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 ATRNL1Q5VV63 1379 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 AK9Q5TCS8 1911 aa10.74□□□□□ -0.69
VRK1-206ENST00000557222 LCE2BO14633 110 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 CTNND1O60716 968 aaKnown RBP10.73□□□□□ -0.69
VRK1-206ENST00000557222 DXOO77932 396 aaKnown RBP10.73□□□□□ -0.69
VRK1-206ENST00000557222 MS4A1P11836 297 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 NDUFV2P19404 249 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 CTGFP29279 349 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 PHKA1P46020 1223 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 GJA8P48165 433 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 RGS3P49796 1198 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 FCGRTP55899 365 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 CCDC102BQ68D86 513 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 AFG3L2Q9Y4W6 797 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 MYPNQ86TC9 1320 aa10.73□□□□□ -0.69
VRK1-206ENST00000557222 MOXD2PA6NHM9 499 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 GDF9O60383 454 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 PTPRAP18433 802 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 PRR20EP86478 221 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 PRR20CP86479 221 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 PRR20DP86480 221 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 PRR20BP86481 221 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 PRR20AP86496 221 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 PDE4DQ08499 809 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 MTFR1Q15390 333 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 UBE2Q1Q7Z7E8 422 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 ZFPM1Q8IX07 1006 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 ARHGAP45Q92619 1136 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 HTATIP2Q9BUP3 242 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 TBC1D2Q9BYX2 928 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 SIL1Q9H173 461 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 NOB1Q9ULX3 412 aaKnown RBP10.72□□□□□ -0.69
VRK1-206ENST00000557222 LRRFIP2Q9Y608 721 aaKnown RBP10.72□□□□□ -0.69
VRK1-206ENST00000557222 ZHX2Q9Y6X8 837 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 RFX7Q2KHR2 1363 aa10.72□□□□□ -0.69
VRK1-206ENST00000557222 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 H0YGN5 161 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 GNAI3P08754 354 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 CCL5P13501 91 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 MTX1Q13505 466 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 IRF5Q13568 498 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 RASGRF1Q13972 1273 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 MVPQ14764 893 aaKnown RBP10.71□□□□□ -0.69
VRK1-206ENST00000557222 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 DZIP1Q86YF9 867 aaKnown RBP10.71□□□□□ -0.69
VRK1-206ENST00000557222 SHISA4Q96DD7 197 aa10.71□□□□□ -0.69
VRK1-206ENST00000557222 MYH2Q9UKX2 1941 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 TNFRSF10AO00220 468 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 IGSF3O75054 1194 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 CD2BP2O95400 341 aaKnown RBP10.7□□□□□ -0.7
VRK1-206ENST00000557222 LDHCP07864 332 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 GSTO1P78417 241 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 PRKCZQ05513 592 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 ERICH6Q7L0X2 663 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 SH3BP5LQ7L8J4 393 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 RETREG3Q86VR2 466 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 ZSCAN29Q8IWY8 852 aaPredicted RBP10.7□□□□□ -0.7
VRK1-206ENST00000557222 RNF208Q9H0X6 261 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 BIN2Q9UBW5 565 aaPredicted RBP10.7□□□□□ -0.7
VRK1-206ENST00000557222 PA2G4Q9UQ80 394 aaKnown RBP10.7□□□□□ -0.7
VRK1-206ENST00000557222 NR2E3Q9Y5X4 410 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 SZT2Q5T011 3432 aa10.7□□□□□ -0.7
VRK1-206ENST00000557222 COL2A1P02458 1487 aaPredicted RBP10.69□□□□□ -0.7
VRK1-206ENST00000557222 MROH7-TTC4A0A0A0MT08 1334 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 A0A1B0GUL7 405 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 DDTLA6NHG4 134 aaPredicted RBP10.69□□□□□ -0.7
VRK1-206ENST00000557222 ZBTB24O43167 697 aaPredicted RBP10.69□□□□□ -0.7
VRK1-206ENST00000557222 SGPL1O95470 568 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 MYCP01106 439 aaPredicted RBP10.69□□□□□ -0.7
VRK1-206ENST00000557222 CYP2C8P10632 490 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 ADORA1P30542 326 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 BTDP43251 543 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms