RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 MINDY4BA8MYZ0 360 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 TNPO2O14787 897 aaKnown RBP14.28□□□□□ -0.12
SYNE2-226ENST00000557084 SIPA1L1O43166 1804 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 PDE1AP54750 535 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 EVX2Q03828 476 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 SEPT2Q15019 361 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 CTR9Q6PD62 1173 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 TMEM179Q6ZVK1 233 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
SYNE2-226ENST00000557084 EVI5LQ96CN4 794 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 CCDC17Q96LX7 622 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 TMEM106CQ9BVX2 250 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 BIN2Q9UBW5 565 aaPredicted RBP14.28□□□□□ -0.12
SYNE2-226ENST00000557084 STAP2Q9UGK3 403 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 SRRDQ9UH36 339 aa14.28□□□□□ -0.12
SYNE2-226ENST00000557084 MYPNQ86TC9 1320 aa14.27□□□□□ -0.12
SYNE2-226ENST00000557084 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 M0R2C6 588 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 HOXA7P31268 230 aaPredicted RBP14.27□□□□□ -0.13
SYNE2-226ENST00000557084 CDK8P49336 464 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 RGS19P49795 217 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 IRX6P78412 446 aaPredicted RBP14.27□□□□□ -0.13
SYNE2-226ENST00000557084 FAM110CQ1W6H9 321 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 CHD1LQ86WJ1 897 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 SMC5Q8IY18 1101 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 ACER1Q8TDN7 264 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 COA7Q96BR5 231 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 KIAA1683Q9H0B3 1180 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 SH2D4AQ9H788 454 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 MKNK2Q9HBH9 465 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 NAV1Q8NEY1 1877 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 PHIPQ8WWQ0 1821 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.13
SYNE2-226ENST00000557084 GSG1L2A8MUP6 293 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L15C9J2P7 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 PATL2C9JE40 543 aaKnown RBP14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L13C9JLJ4 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L11C9JVI0 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L18D6R9N7 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L22D6RA61 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L17D6RBQ6 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L19D6RCP7 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L20D6RJB6 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 MYCP01106 439 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-226ENST00000557084 IGHDP01880 384 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 HERVK_113P62684 666 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 ATP2B2Q01814 1243 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 USP17L24Q0WX57 530 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 C16orf86Q6ZW13 317 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 STK11IPQ8N1F8 1099 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 GTF3C2Q8WUA4 911 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-226ENST00000557084 ARMC5Q96C12 935 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 P2RX7Q99572 595 aaKnown RBP14.26□□□□□ -0.13
SYNE2-226ENST00000557084 ZNF287Q9HBT7 754 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 ARHGEF10LQ9HCE6 1279 aa14.26□□□□□ -0.13
SYNE2-226ENST00000557084 CWC22Q9HCG8 908 aaKnown RBP14.26□□□□□ -0.13
SYNE2-226ENST00000557084 KIAA0100Q14667 2235 aaKnown RBP14.26□□□□□ -0.13
SYNE2-226ENST00000557084 SALL3Q9BXA9 1300 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 SLC3A2P08195 630 aaKnown RBP14.25□□□□□ -0.13
SYNE2-226ENST00000557084 AKR1B1P15121 316 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 CTGFP29279 349 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 NUCB1Q02818 461 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 ICA1Q05084 483 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 PRKCZQ05513 592 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 SBK1Q52WX2 424 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 GPRC5AQ8NFJ5 357 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 SH3TC2Q8TF17 1288 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 RILPL2Q969X0 211 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 PAGR1Q9BTK6 254 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 NAPBQ9H115 298 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 PTPRFP10586 1907 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 MYH7P12883 1935 aa14.25□□□□□ -0.13
SYNE2-226ENST00000557084 RAD21O60216 631 aa14.24□□□□□ -0.13
SYNE2-226ENST00000557084 VCAM1P19320 739 aa14.24□□□□□ -0.13
SYNE2-226ENST00000557084 GRK4P32298 578 aa14.24□□□□□ -0.13
SYNE2-226ENST00000557084 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
SYNE2-226ENST00000557084 ZNF333Q96JL9 665 aa14.24□□□□□ -0.13
SYNE2-226ENST00000557084 C12orf42Q96LP6 360 aa14.24□□□□□ -0.13
SYNE2-226ENST00000557084 SEC62Q99442 399 aaKnown RBP14.24□□□□□ -0.13
SYNE2-226ENST00000557084 TANGO6Q9C0B7 1094 aa14.24□□□□□ -0.13
SYNE2-226ENST00000557084 KANSL2Q9H9L4 492 aa14.24□□□□□ -0.13
SYNE2-226ENST00000557084 SMIM22K7EJ46 135 aa14.23□□□□□ -0.13
SYNE2-226ENST00000557084 FLT3LGP49771 235 aa14.23□□□□□ -0.13
SYNE2-226ENST00000557084 IFNL3Q8IZI9 196 aa14.23□□□□□ -0.13
SYNE2-226ENST00000557084 ZNF444Q8N0Y2 327 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-226ENST00000557084 RPAP3Q9H6T3 665 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-226ENST00000557084 DDX60LQ5H9U9 1706 aaKnown RBP14.22□□□□□ -0.13
SYNE2-226ENST00000557084 BAZ2AQ9UIF9 1905 aaKnown RBP14.22□□□□□ -0.13
SYNE2-226ENST00000557084 ADCY3O60266 1144 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 UBXN2AP68543 259 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 CCNA1P78396 465 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 PDE4BQ07343 736 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 CATSPERGQ6ZRH7 1159 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 CLEC10AQ8IUN9 316 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 SLAIN1Q8ND83 568 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 LPAR1Q92633 364 aa14.22□□□□□ -0.13
SYNE2-226ENST00000557084 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms