RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 REC114Q7Z4M0 266 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 CDH24Q86UP0 819 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 MFSD4AQ8N468 514 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 FBXO27Q8NI29 283 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 XAGE3Q8WTP9 111 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 TPX2Q9ULW0 747 aaKnown RBP7.04□□□□□ -1.28
ATXN3-246ENST00000557030 CEP131Q9UPN4 1083 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 ROBO2Q9HCK4 1378 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 CUX2O14529 1486 aa7.04□□□□□ -1.28
ATXN3-246ENST00000557030 PEG3Q9GZU2 1588 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 RBM47A0AV96 593 aaKnown RBP7.03□□□□□ -1.28
ATXN3-246ENST00000557030 PAX4O43316 350 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 DNAJA2O60884 412 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 BPNT1O95861 308 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 JUNBP17275 347 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-246ENST00000557030 KIR3DL1P43629 444 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 ANGEL2Q5VTE6 544 aaKnown RBP7.03□□□□□ -1.28
ATXN3-246ENST00000557030 SLC23A3Q6PIS1 610 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 CYB5D2Q8WUJ1 264 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 Q96M66 194 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 HSPA12BQ96MM6 686 aa7.03□□□□□ -1.28
ATXN3-246ENST00000557030 ATE1O95260 518 aa7.02□□□□□ -1.29
ATXN3-246ENST00000557030 HTR3BO95264 441 aa7.02□□□□□ -1.29
ATXN3-246ENST00000557030 EIF4A3P38919 411 aaKnown RBP7.02□□□□□ -1.29
ATXN3-246ENST00000557030 TNK2Q07912 1038 aa7.02□□□□□ -1.29
ATXN3-246ENST00000557030 SNAP47Q5SQN1 464 aa7.02□□□□□ -1.29
ATXN3-246ENST00000557030 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
ATXN3-246ENST00000557030 LMCD1Q9NZU5 365 aa7.02□□□□□ -1.29
ATXN3-246ENST00000557030 REV1Q9UBZ9 1251 aa7.02□□□□□ -1.29
ATXN3-246ENST00000557030 ADAMTS1Q9UHI8 967 aa7.02□□□□□ -1.29
ATXN3-246ENST00000557030 SRFP11831 508 aa7.01□□□□□ -1.29
ATXN3-246ENST00000557030 CRKP46108 304 aa7.01□□□□□ -1.29
ATXN3-246ENST00000557030 HS2ST1Q7LGA3 356 aa7.01□□□□□ -1.29
ATXN3-246ENST00000557030 THAP5Q7Z6K1 395 aa7.01□□□□□ -1.29
ATXN3-246ENST00000557030 ATG4DQ86TL0 474 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-246ENST00000557030 FAM9AQ8IZU1 332 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-246ENST00000557030 TMEM87AQ8NBN3 555 aa7.01□□□□□ -1.29
ATXN3-246ENST00000557030 PIWIL2Q8TC59 973 aaKnown RBP7.01□□□□□ -1.29
ATXN3-246ENST00000557030 CHURC1-FNTBB4DL54 471 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 GRIN3BO60391 1043 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 CYP7A1P22680 504 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 ETV3P41162 512 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 DIEXFQ68CQ4 756 aaKnown RBP7□□□□□ -1.29
ATXN3-246ENST00000557030 LRRN4CLQ8ND94 238 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 FAM13CQ8NE31 585 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 PI4K2BQ8TCG2 481 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 ZNF296Q8WUU4 475 aaPredicted RBP7□□□□□ -1.29
ATXN3-246ENST00000557030 VWCEQ96DN2 955 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 BACH2Q9BYV9 841 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 ATP13A1Q9HD20 1204 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 GGT7Q9UJ14 662 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 SUPT16HQ9Y5B9 1047 aaKnown RBP7□□□□□ -1.29
ATXN3-246ENST00000557030 CARMIL2Q6F5E8 1435 aa7□□□□□ -1.29
ATXN3-246ENST00000557030 VAMP1P23763 118 aa6.99□□□□□ -1.29
ATXN3-246ENST00000557030 YARSP54577 528 aaKnown RBP6.99□□□□□ -1.29
ATXN3-246ENST00000557030 FLAD1Q8NFF5 587 aa6.99□□□□□ -1.29
ATXN3-246ENST00000557030 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-246ENST00000557030 EHMT1Q9H9B1 1298 aa6.99□□□□□ -1.29
ATXN3-246ENST00000557030 RC3H2Q9HBD1 1191 aaKnown RBP6.99□□□□□ -1.29
ATXN3-246ENST00000557030 RNF114Q9Y508 228 aa6.99□□□□□ -1.29
ATXN3-246ENST00000557030 ATAD2BQ9ULI0 1458 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 FAM155AB1AL88 458 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-246ENST00000557030 CBX7O95931 251 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 FANCCQ00597 558 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 ZP2Q05996 745 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 IKZF1Q13422 519 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 CDKAL1Q5VV42 579 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 BRMS1Q9HCU9 246 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 PRDM7Q9NQW5 492 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-246ENST00000557030 ABCC8Q09428 1581 aa6.98□□□□□ -1.29
ATXN3-246ENST00000557030 SLC22A31A6NKX4 558 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 H3BS24 57 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 TLR3O15455 904 aaKnown RBP6.97□□□□□ -1.29
ATXN3-246ENST00000557030 ESR1P03372 595 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 CWF19L2Q2TBE0 894 aaKnown RBP6.97□□□□□ -1.29
ATXN3-246ENST00000557030 GAB4Q2WGN9 574 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 SLITRK4Q8IW52 837 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 DTWD2Q8NBA8 298 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 RNF141Q8WVD5 230 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 ASIC4Q96FT7 647 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 NT5C1AQ9BXI3 368 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 GPR62Q9BZJ7 368 aa6.97□□□□□ -1.29
ATXN3-246ENST00000557030 METTL5Q9NRN9 209 aaKnown RBP6.97□□□□□ -1.29
ATXN3-246ENST00000557030 REXO1Q8N1G1 1221 aaKnown RBP6.96□□□□□ -1.3
ATXN3-246ENST00000557030 BAHD1Q8TBE0 780 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-246ENST00000557030 MRRFQ96E11 262 aaKnown RBP6.96□□□□□ -1.3
ATXN3-246ENST00000557030 EAF1Q96JC9 268 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-246ENST00000557030 CCDC74BQ96LY2 380 aa6.96□□□□□ -1.3
ATXN3-246ENST00000557030 UBP1Q9NZI7 540 aa6.96□□□□□ -1.3
ATXN3-246ENST00000557030 CTNND2Q9UQB3 1225 aa6.96□□□□□ -1.3
ATXN3-246ENST00000557030 UNCXA6NJT0 531 aa6.95□□□□□ -1.3
ATXN3-246ENST00000557030 RGS13O14921 159 aa6.95□□□□□ -1.3
ATXN3-246ENST00000557030 RECKO95980 971 aa6.95□□□□□ -1.3
ATXN3-246ENST00000557030 TXKP42681 527 aa6.95□□□□□ -1.3
ATXN3-246ENST00000557030 CDCP2Q5VXM1 449 aa6.95□□□□□ -1.3
ATXN3-246ENST00000557030 TMPRSS7Q7RTY8 843 aa6.95□□□□□ -1.3
ATXN3-246ENST00000557030 UBE2FQ969M7 185 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms