RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 TLR9Q9NR96 1032 aa15.59■□□□□ 0.09
ABCD4-226ENST00000556971 RBPJLQ9UBG7 517 aa15.59■□□□□ 0.09
ABCD4-226ENST00000556971 FAM198AQ9UFP1 575 aa15.59■□□□□ 0.09
ABCD4-226ENST00000556971 IQSEC3Q9UPP2 1182 aaPredicted RBP15.59■□□□□ 0.09
ABCD4-226ENST00000556971 CTNND1O60716 968 aaKnown RBP15.58■□□□□ 0.08
ABCD4-226ENST00000556971 FGBP02675 491 aa15.58■□□□□ 0.08
ABCD4-226ENST00000556971 NEFMP07197 916 aa15.58■□□□□ 0.08
ABCD4-226ENST00000556971 WDR78Q5VTH9 848 aa15.58■□□□□ 0.08
ABCD4-226ENST00000556971 BMP8AQ7Z5Y6 402 aa15.58■□□□□ 0.08
ABCD4-226ENST00000556971 TOX2Q96NM4 488 aa15.58■□□□□ 0.08
ABCD4-226ENST00000556971 FSD1Q9BTV5 496 aa15.58■□□□□ 0.08
ABCD4-226ENST00000556971 DMDP11532 3685 aa15.58■□□□□ 0.08
ABCD4-226ENST00000556971 VPS13AQ96RL7 3174 aa15.58■□□□□ 0.08
ABCD4-226ENST00000556971 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.57■□□□□ 0.08
ABCD4-226ENST00000556971 TMEM221A6NGB7 291 aa15.57■□□□□ 0.08
ABCD4-226ENST00000556971 M0R296 226 aa15.57■□□□□ 0.08
ABCD4-226ENST00000556971 HOXB3P14651 431 aaPredicted RBP15.57■□□□□ 0.08
ABCD4-226ENST00000556971 HIBADHP31937 336 aaKnown RBP15.57■□□□□ 0.08
ABCD4-226ENST00000556971 ADSSL1Q8N142 457 aa15.57■□□□□ 0.08
ABCD4-226ENST00000556971 PHAXQ9H814 394 aaKnown RBP15.57■□□□□ 0.08
ABCD4-226ENST00000556971 SLC4A7Q9Y6M7 1214 aa15.57■□□□□ 0.08
ABCD4-226ENST00000556971 EP300Q09472 2414 aaPredicted RBP15.56■□□□□ 0.08
ABCD4-226ENST00000556971 LPXNO60711 386 aa15.56■□□□□ 0.08
ABCD4-226ENST00000556971 ARHGEF15O94989 841 aa15.56■□□□□ 0.08
ABCD4-226ENST00000556971 IRS1P35568 1242 aa15.56■□□□□ 0.08
ABCD4-226ENST00000556971 VCPP55072 806 aaKnown RBP15.56■□□□□ 0.08
ABCD4-226ENST00000556971 PKN1Q16512 942 aa15.56■□□□□ 0.08
ABCD4-226ENST00000556971 TMEM67Q5HYA8 995 aa15.56■□□□□ 0.08
ABCD4-226ENST00000556971 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
ABCD4-226ENST00000556971 ZNF280CQ8ND82 737 aa15.56■□□□□ 0.08
ABCD4-226ENST00000556971 METTL22Q9BUU2 404 aaPredicted RBP15.56■□□□□ 0.08
ABCD4-226ENST00000556971 MAST3O60307 1309 aa15.55■□□□□ 0.08
ABCD4-226ENST00000556971 ATP2A2P16615 1042 aaKnown RBP15.55■□□□□ 0.08
ABCD4-226ENST00000556971 UBE3BQ7Z3V4 1068 aa15.55■□□□□ 0.08
ABCD4-226ENST00000556971 UPF3BQ9BZI7 483 aaKnown RBP15.55■□□□□ 0.08
ABCD4-226ENST00000556971 CEP250Q9BV73 2442 aa15.55■□□□□ 0.08
ABCD4-226ENST00000556971 SMCHD1A6NHR9 2005 aa15.55■□□□□ 0.08
ABCD4-226ENST00000556971 ATAD5Q96QE3 1844 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 SLC15A5A6NIM6 579 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 ZBBXA8MT70 800 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 GLRX3O76003 335 aaKnown RBP15.54■□□□□ 0.08
ABCD4-226ENST00000556971 PGK1P00558 417 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 IGHA2P01877 340 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 HOXC6P09630 235 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 CYP2C18P33260 490 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 HERC4Q5GLZ8 1057 aaPredicted RBP15.54■□□□□ 0.08
ABCD4-226ENST00000556971 HHIPL2Q6UWX4 724 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 SPRED2Q7Z698 418 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 GDPD5Q8WTR4 605 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 TBC1D22AQ8WUA7 517 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 FAM84BQ96KN1 310 aaPredicted RBP15.54■□□□□ 0.08
ABCD4-226ENST00000556971 MRIQ9BWK5 157 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 XPNPEP3Q9NQH7 507 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 STARD7Q9NQZ5 370 aa15.54■□□□□ 0.08
ABCD4-226ENST00000556971 C19orf67A6NJJ6 358 aa15.53■□□□□ 0.08
ABCD4-226ENST00000556971 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
ABCD4-226ENST00000556971 PTPREP23469 700 aa15.53■□□□□ 0.08
ABCD4-226ENST00000556971 TAP1Q03518 808 aa15.53■□□□□ 0.08
ABCD4-226ENST00000556971 PRAMEF19Q5SWL8 479 aa15.53■□□□□ 0.08
ABCD4-226ENST00000556971 FBXL6Q8N531 539 aa15.53■□□□□ 0.08
ABCD4-226ENST00000556971 EDAQ92838 391 aa15.53■□□□□ 0.08
ABCD4-226ENST00000556971 BABAM1Q9NWV8 329 aa15.53■□□□□ 0.08
ABCD4-226ENST00000556971 ANKRD18BA2A2Z9 1011 aa15.52■□□□□ 0.08
ABCD4-226ENST00000556971 H3BQ06 376 aaPredicted RBP15.52■□□□□ 0.08
ABCD4-226ENST00000556971 IGKV5-2P06315 115 aa15.52■□□□□ 0.08
ABCD4-226ENST00000556971 GRB14Q14449 540 aa15.52■□□□□ 0.08
ABCD4-226ENST00000556971 SH3BP5LQ7L8J4 393 aa15.52■□□□□ 0.08
ABCD4-226ENST00000556971 RNF180Q86T96 592 aa15.52■□□□□ 0.08
ABCD4-226ENST00000556971 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.08
ABCD4-226ENST00000556971 ZNF292O60281 2723 aa15.51■□□□□ 0.07
ABCD4-226ENST00000556971 PER1O15534 1290 aaPredicted RBP15.51■□□□□ 0.07
ABCD4-226ENST00000556971 KDM4AO75164 1064 aa15.51■□□□□ 0.07
ABCD4-226ENST00000556971 PUS10Q3MIT2 529 aaKnown RBP15.51■□□□□ 0.07
ABCD4-226ENST00000556971 SH3D19Q5HYK7 790 aa15.51■□□□□ 0.07
ABCD4-226ENST00000556971 TRIM67Q6ZTA4 783 aa15.51■□□□□ 0.07
ABCD4-226ENST00000556971 ADHFE1Q8IWW8 467 aa15.51■□□□□ 0.07
ABCD4-226ENST00000556971 FRAT2O75474 233 aaPredicted RBP15.5■□□□□ 0.07
ABCD4-226ENST00000556971 HSPA5P11021 654 aaKnown RBP15.5■□□□□ 0.07
ABCD4-226ENST00000556971 HOXA7P31268 230 aaPredicted RBP15.5■□□□□ 0.07
ABCD4-226ENST00000556971 NBL1P41271 181 aa15.5■□□□□ 0.07
ABCD4-226ENST00000556971 MTMR2Q13614 643 aa15.5■□□□□ 0.07
ABCD4-226ENST00000556971 PRKAG3Q9UGI9 489 aa15.5■□□□□ 0.07
ABCD4-226ENST00000556971 IVNS1ABPQ9Y6Y0 642 aa15.5■□□□□ 0.07
ABCD4-226ENST00000556971 FAM196BA6NMK8 535 aa15.49■□□□□ 0.07
ABCD4-226ENST00000556971 RARBP10826 455 aa15.49■□□□□ 0.07
ABCD4-226ENST00000556971 RGS3P49796 1198 aa15.49■□□□□ 0.07
ABCD4-226ENST00000556971 MAP3K10Q02779 954 aa15.49■□□□□ 0.07
ABCD4-226ENST00000556971 OLFML2BQ68BL8 750 aa15.49■□□□□ 0.07
ABCD4-226ENST00000556971 PLEKHF1Q96S99 279 aa15.49■□□□□ 0.07
ABCD4-226ENST00000556971 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
ABCD4-226ENST00000556971 FLNBO75369 2602 aaKnown RBP15.49■□□□□ 0.07
ABCD4-226ENST00000556971 MROH7Q68CQ1 1323 aa15.48■□□□□ 0.07
ABCD4-226ENST00000556971 WDR87Q6ZQQ6 2873 aa15.48■□□□□ 0.07
ABCD4-226ENST00000556971 CSF1RP07333 972 aa15.48■□□□□ 0.07
ABCD4-226ENST00000556971 HOXB7P09629 217 aa15.48■□□□□ 0.07
ABCD4-226ENST00000556971 DIXDC1Q155Q3 683 aa15.48■□□□□ 0.07
ABCD4-226ENST00000556971 CWF19L2Q2TBE0 894 aaKnown RBP15.48■□□□□ 0.07
ABCD4-226ENST00000556971 VPS37DQ86XT2 251 aa15.48■□□□□ 0.07
ABCD4-226ENST00000556971 RNF135Q8IUD6 432 aa15.48■□□□□ 0.07
ABCD4-226ENST00000556971 GTF3C2Q8WUA4 911 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms