RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 FEZ1Q99689 392 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 LBHD1Q9BQE6 289 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 DBNDD2Q9BQY9 259 aa11.07□□□□□ -0.64
HNRNPC-227ENST00000556897 CDK5RAP2Q96SN8 1893 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 MAST2Q6P0Q8 1798 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 GLRX3O76003 335 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 CNGA1P29973 690 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 ATN1P54259 1190 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 DYNLL1P63167 89 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 CCNA1P78396 465 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 TNNI3KQ59H18 835 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 CCDC158Q5M9N0 1113 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 MFSD14CQ5VZR4 134 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 DDX20Q9UHI6 824 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 RABGAP1Q9Y3P9 1069 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 FPGT-TNNI3KV9GXZ4 949 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 EYSQ5T1H1 3165 aa11.06□□□□□ -0.64
HNRNPC-227ENST00000556897 FOCADQ5VW36 1801 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L15C9J2P7 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L13C9JLJ4 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L11C9JVI0 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L18D6R9N7 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L22D6RA61 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L17D6RBQ6 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L19D6RCP7 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L20D6RJB6 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 TRIM27P14373 513 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 VCAM1P19320 739 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 CYP2C19P33261 490 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 ATP2B2Q01814 1243 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 USP17L24Q0WX57 530 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 LPAR1Q92633 364 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 C12orf42Q96LP6 360 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 PIH1D3Q9NQM4 214 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 TNNQ9UQP3 1299 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
HNRNPC-227ENST00000556897 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 SLC15A5A6NIM6 579 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 DNM1LO00429 736 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 MSCO60682 206 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 HOXC6P09630 235 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 CYP7A1P22680 504 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 PTPREP23469 700 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 ZAP70P43403 619 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 OS9Q13438 667 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 GRB14Q14449 540 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 CATSPERGQ6ZRH7 1159 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 MIGA1Q8NAN2 632 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 TRPV1Q8NER1 839 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 NPLOC4Q8TAT6 608 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 ACER1Q8TDN7 264 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 CLUAP1Q96AJ1 413 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 GPR108Q9NPR9 543 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 BTBD7Q9P203 1132 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 PRKAG2Q9UGJ0 569 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 SERPINB13Q9UIV8 391 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 IVNS1ABPQ9Y6Y0 642 aa11.04□□□□□ -0.64
HNRNPC-227ENST00000556897 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 IDH1O75874 414 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 USP5P45974 858 aa11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 USP14P54578 494 aa11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 RTP1P59025 263 aa11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 ABCB5Q2M3G0 1257 aa11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 GJC2Q5T442 439 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 ZNF697Q5TEC3 545 aa11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 LBX2Q6XYB7 198 aa11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 FRAT1Q92837 279 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 ZNF512BQ96KM6 892 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 KIAA1683Q9H0B3 1180 aa11.03□□□□□ -0.64
HNRNPC-227ENST00000556897 PRUNE2Q8WUY3 3088 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 SURF6O75683 361 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 IGHA2P01877 340 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 CYBAP13498 195 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 POLA2Q14181 598 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 SHHQ15465 462 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 CERKLQ49MI3 558 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 MAGEB6Q8N7X4 407 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 CDX2Q99626 313 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 EHD4Q9H223 541 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 RPAP3Q9H6T3 665 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 PRDM5Q9NQX1 630 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 DBNLQ9UJU6 430 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 ATP11BQ9Y2G3 1177 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 TTC28Q96AY4 2481 aa11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 SPTBN5Q9NRC6 3674 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-227ENST00000556897 MYH1P12882 1939 aa11.01□□□□□ -0.65
HNRNPC-227ENST00000556897 IGSF3O75054 1194 aa11.01□□□□□ -0.65
HNRNPC-227ENST00000556897 BCAR3O75815 825 aa11.01□□□□□ -0.65
HNRNPC-227ENST00000556897 C9orf50Q5SZB4 431 aa11.01□□□□□ -0.65
HNRNPC-227ENST00000556897 ANO1Q5XXA6 986 aa11.01□□□□□ -0.65
HNRNPC-227ENST00000556897 DPP9Q86TI2 863 aa11.01□□□□□ -0.65
HNRNPC-227ENST00000556897 TTC6Q86TZ1 520 aa11.01□□□□□ -0.65
HNRNPC-227ENST00000556897 ARRDC4Q8NCT1 418 aa11.01□□□□□ -0.65
HNRNPC-227ENST00000556897 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms