RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SLC45A1Q9Y2W3 748 aa16.84■□□□□ 0.29
SLIRP-207ENST00000556831 C19orf81C9J6K1 198 aa16.83■□□□□ 0.28
SLIRP-207ENST00000556831 OSBPP22059 807 aa16.83■□□□□ 0.28
SLIRP-207ENST00000556831 MFAP1P55081 439 aaKnown RBP16.83■□□□□ 0.28
SLIRP-207ENST00000556831 BACE1P56817 501 aa16.83■□□□□ 0.28
SLIRP-207ENST00000556831 GABPAQ06546 454 aa16.83■□□□□ 0.28
SLIRP-207ENST00000556831 OTOP1Q7RTM1 612 aa16.83■□□□□ 0.28
SLIRP-207ENST00000556831 OSBPL3Q9H4L5 887 aa16.83■□□□□ 0.28
SLIRP-207ENST00000556831 HELLSQ9NRZ9 838 aa16.83■□□□□ 0.28
SLIRP-207ENST00000556831 DIAPH3Q9NSV4 1193 aa16.83■□□□□ 0.28
SLIRP-207ENST00000556831 GSG1L2A8MUP6 293 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 PATL2C9JE40 543 aaKnown RBP16.82■□□□□ 0.28
SLIRP-207ENST00000556831 HIP1O00291 1037 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 USP14P54578 494 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 IRX3P78415 501 aaPredicted RBP16.82■□□□□ 0.28
SLIRP-207ENST00000556831 CTR9Q6PD62 1173 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 TMEM179Q6ZVK1 233 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 SH2D4AQ9H788 454 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 MKNK2Q9HBH9 465 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 HPS5Q9UPZ3 1129 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 TRIM17Q9Y577 477 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
SLIRP-207ENST00000556831 PEX10O60683 326 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 GUCY1A2P33402 732 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 CDK8P49336 464 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 C17orf99Q6UX52 265 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 C16orf86Q6ZW13 317 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 IFNL3Q8IZI9 196 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 EFCC1Q9HA90 598 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 ARHGEF10LQ9HCE6 1279 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 BRCA2P51587 3418 aa16.81■□□□□ 0.28
SLIRP-207ENST00000556831 ZYXQ15942 572 aaKnown RBP16.8■□□□□ 0.28
SLIRP-207ENST00000556831 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
SLIRP-207ENST00000556831 SH3D19Q5HYK7 790 aa16.8■□□□□ 0.28
SLIRP-207ENST00000556831 CLEC10AQ8IUN9 316 aa16.8■□□□□ 0.28
SLIRP-207ENST00000556831 EPB41L4AQ9HCS5 686 aaPredicted RBP16.8■□□□□ 0.28
SLIRP-207ENST00000556831 ICA1Q05084 483 aa16.79■□□□□ 0.28
SLIRP-207ENST00000556831 PDE4BQ07343 736 aa16.79■□□□□ 0.28
SLIRP-207ENST00000556831 SEPT2Q15019 361 aa16.79■□□□□ 0.28
SLIRP-207ENST00000556831 STK11IPQ8N1F8 1099 aa16.79■□□□□ 0.28
SLIRP-207ENST00000556831 ACER1Q8TDN7 264 aa16.79■□□□□ 0.28
SLIRP-207ENST00000556831 ROBO3Q96MS0 1386 aa16.78■□□□□ 0.28
SLIRP-207ENST00000556831 COL6A3P12111 3177 aa16.78■□□□□ 0.28
SLIRP-207ENST00000556831 LACTBP83111 547 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-207ENST00000556831 ATP2B2Q01814 1243 aa16.78■□□□□ 0.28
SLIRP-207ENST00000556831 NMIQ13287 307 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-207ENST00000556831 FBXO46Q6PJ61 603 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-207ENST00000556831 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
SLIRP-207ENST00000556831 CENPQQ7L2Z9 268 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-207ENST00000556831 FAM227BQ96M60 508 aa16.78■□□□□ 0.28
SLIRP-207ENST00000556831 KIAA1683Q9H0B3 1180 aa16.78■□□□□ 0.28
SLIRP-207ENST00000556831 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
SLIRP-207ENST00000556831 MKI67P46013 3256 aaKnown RBP16.77■□□□□ 0.28
SLIRP-207ENST00000556831 A0A0D9SFI3 127 aa16.77■□□□□ 0.28
SLIRP-207ENST00000556831 FOXP2O15409 715 aa16.77■□□□□ 0.28
SLIRP-207ENST00000556831 FMNL1O95466 1100 aaPredicted RBP16.77■□□□□ 0.28
SLIRP-207ENST00000556831 GNRH1P01148 92 aa16.77■□□□□ 0.28
SLIRP-207ENST00000556831 BCRP11274 1271 aa16.77■□□□□ 0.28
SLIRP-207ENST00000556831 AKR1B1P15121 316 aa16.77■□□□□ 0.28
SLIRP-207ENST00000556831 SDSP20132 328 aa16.77■□□□□ 0.28
SLIRP-207ENST00000556831 GCLCP48506 637 aaPredicted RBP16.77■□□□□ 0.28
SLIRP-207ENST00000556831 TTC22Q5TAA0 569 aa16.77■□□□□ 0.28
SLIRP-207ENST00000556831 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
SLIRP-207ENST00000556831 MGAMO43451 1857 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 HOXD10P28358 340 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 FCGRTP55899 365 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 PPARAQ07869 468 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 POTEEQ6S8J3 1075 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 CWC27Q6UX04 472 aaKnown RBP16.76■□□□□ 0.27
SLIRP-207ENST00000556831 GTF3C2Q8WUA4 911 aaPredicted RBP16.76■□□□□ 0.27
SLIRP-207ENST00000556831 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 ASCC2Q9H1I8 757 aaPredicted RBP16.76■□□□□ 0.27
SLIRP-207ENST00000556831 KANSL2Q9H9L4 492 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 EMILIN3Q9NT22 766 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 PTCH2Q9Y6C5 1203 aa16.76■□□□□ 0.27
SLIRP-207ENST00000556831 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
SLIRP-207ENST00000556831 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
SLIRP-207ENST00000556831 RAD21O60216 631 aa16.75■□□□□ 0.27
SLIRP-207ENST00000556831 PDE4AP27815 886 aa16.75■□□□□ 0.27
SLIRP-207ENST00000556831 KIAA1755Q5JYT7 1200 aa16.75■□□□□ 0.27
SLIRP-207ENST00000556831 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
SLIRP-207ENST00000556831 C12orf42Q96LP6 360 aa16.75■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 TSPY3P0CV98 308 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 TSPY8P0CW00 308 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 VCAM1P19320 739 aa16.74■□□□□ 0.27
SLIRP-207ENST00000556831 HOXA7P31268 230 aaPredicted RBP16.74■□□□□ 0.27
SLIRP-207ENST00000556831 PSMC4P43686 418 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms