RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 CCDC129Q6ZRS4 1044 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 SIAH1Q8IUQ4 282 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 SPICE1Q8N0Z3 855 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 PROCA1Q8NCQ7 364 aaPredicted RBP7.67□□□□□ -1.18
LGMN-213ENST00000556790 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.67□□□□□ -1.18
LGMN-213ENST00000556790 OSBP2Q969R2 916 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 FEZ1Q99689 392 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 WDR18Q9BV38 432 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 TMEM106CQ9BVX2 250 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 CRNKL1Q9BZJ0 848 aaKnown RBP7.67□□□□□ -1.18
LGMN-213ENST00000556790 DCTPP1Q9H773 170 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 TMOD4Q9NZQ9 345 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 RBPJLQ9UBG7 517 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 SLC4A4Q9Y6R1 1079 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 RLFQ13129 1914 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 ALPK3Q96L96 1907 aa7.67□□□□□ -1.18
LGMN-213ENST00000556790 COL11A1P12107 1806 aaPredicted RBP7.66□□□□□ -1.18
LGMN-213ENST00000556790 VCAM1P19320 739 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 IRX3P78415 501 aaPredicted RBP7.66□□□□□ -1.18
LGMN-213ENST00000556790 ATP2B2Q01814 1243 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 TTF1Q15361 905 aaPredicted RBP7.66□□□□□ -1.18
LGMN-213ENST00000556790 B4GALNT3Q6L9W6 998 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 CTR9Q6PD62 1173 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 NBPF11Q86T75 865 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 EXOC6Q8TAG9 804 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 PI4K2BQ8TCG2 481 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 DIS3LQ8TF46 1054 aaKnown RBP7.66□□□□□ -1.18
LGMN-213ENST00000556790 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 RPAP3Q9H6T3 665 aaPredicted RBP7.66□□□□□ -1.18
LGMN-213ENST00000556790 AS3MTQ9HBK9 375 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 EPB41L4AQ9HCS5 686 aaPredicted RBP7.66□□□□□ -1.18
LGMN-213ENST00000556790 INCENPQ9NQS7 918 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 ECHDC1Q9NTX5 307 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
LGMN-213ENST00000556790 MINDY4BA8MYZ0 360 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 RAD21O60216 631 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 PRDM1O75626 825 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 CDK8P49336 464 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 FAM110CQ1W6H9 321 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 PARP14Q460N5 1801 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 WDR78Q5VTH9 848 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 RASGRP2Q7LDG7 609 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 TTC6Q86TZ1 520 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 TRIB2Q92519 343 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 DEFB118Q96PH6 123 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 NUP88Q99567 741 aaPredicted RBP7.65□□□□□ -1.18
LGMN-213ENST00000556790 EHD4Q9H223 541 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 FLRT1Q9NZU1 646 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 GJD2Q9UKL4 321 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 PNMA3Q9UL41 463 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 SLC45A1Q9Y2W3 748 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 TACC3Q9Y6A5 838 aa7.65□□□□□ -1.18
LGMN-213ENST00000556790 GSG1L2A8MUP6 293 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 IGHDP01880 384 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 HOXD10P28358 340 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 HOXA7P31268 230 aaPredicted RBP7.64□□□□□ -1.19
LGMN-213ENST00000556790 ERVK-9P63128 1117 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 ERVK-24P63145 666 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 ARHGEF6Q15052 776 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 ANKRD45Q5TZF3 282 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 C12orf60Q5U649 245 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 PRPF38BQ5VTL8 546 aaKnown RBP7.64□□□□□ -1.19
LGMN-213ENST00000556790 CATSPERGQ6ZRH7 1159 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 KBTBD3Q8NAB2 608 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 NKX2-3Q8TAU0 364 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 U2AF1L4Q8WU68 220 aaKnown RBP7.64□□□□□ -1.19
LGMN-213ENST00000556790 COA7Q96BR5 231 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 STRBPQ96SI9 672 aaKnown RBP7.64□□□□□ -1.19
LGMN-213ENST00000556790 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.64□□□□□ -1.19
LGMN-213ENST00000556790 CABP5Q9NP86 173 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 FBXO28Q9NVF7 368 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 MORF4L1Q9UBU8 362 aa7.64□□□□□ -1.19
LGMN-213ENST00000556790 SALL3Q9BXA9 1300 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 GREB1LQ9C091 1923 aaPredicted RBP7.63□□□□□ -1.19
LGMN-213ENST00000556790 MYH4Q9Y623 1939 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 SPDYE16A6NNV3 312 aaPredicted RBP7.63□□□□□ -1.19
LGMN-213ENST00000556790 C19orf81C9J6K1 198 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 H0YGN5 161 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 FOXP2O15409 715 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 RNF113AO15541 343 aaKnown RBP7.63□□□□□ -1.19
LGMN-213ENST00000556790 GPAA1O43292 621 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 GNRH1P01148 92 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 EEF2P13639 858 aaKnown RBP7.63□□□□□ -1.19
LGMN-213ENST00000556790 TAL1P17542 331 aaPredicted RBP7.63□□□□□ -1.19
LGMN-213ENST00000556790 CCND3P30281 292 aaPredicted RBP7.63□□□□□ -1.19
LGMN-213ENST00000556790 PABPC4Q13310 644 aaKnown RBP eCLIP7.63□□□□□ -1.19
LGMN-213ENST00000556790 UBE3CQ15386 1083 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 VPS53Q5VIR6 699 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 ANO1Q5XXA6 986 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 GPR142Q7Z601 462 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 SLAIN1Q8ND83 568 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 GPRC5AQ8NFJ5 357 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 NPLOC4Q8TAT6 608 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 ATG4CQ96DT6 458 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 TANGO6Q9C0B7 1094 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 LNPKQ9C0E8 428 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.63□□□□□ -1.19
LGMN-213ENST00000556790 KIAA1683Q9H0B3 1180 aa7.63□□□□□ -1.19
LGMN-213ENST00000556790 A0A0G2JMZ2 1700 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms