RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 SLC44A5Q8NCS7 719 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 DYNLL2Q96FJ2 89 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 PARK7Q99497 189 aaKnown RBP12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 RAD50Q92878 1312 aa12.59□□□□□ -0.39
MTHFD1-214ENST00000556771 MPHOSPH10O00566 681 aaKnown RBP12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 TLR2O60603 784 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 FKTNO75072 461 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 HMGCS2P54868 508 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 JAG1P78504 1218 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 EVX2Q03828 476 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 PDE4BQ07343 736 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 MTMR2Q13614 643 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 GPAT2Q6NUI2 795 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 CCDC84Q86UT8 332 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 ZNF296Q8WUU4 475 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 KIAA1683Q9H0B3 1180 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 SH2D4AQ9H788 454 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
MTHFD1-214ENST00000556771 FOXP2O15409 715 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 HSPD1P10809 573 aaKnown RBP12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 PPARAQ07869 468 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 ARHGEF6Q15052 776 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 COL13A1Q5TAT6 717 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 CWC27Q6UX04 472 aaKnown RBP12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 ZNF589Q86UQ0 364 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 ERO1AQ96HE7 468 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 C12orf42Q96LP6 360 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 FEZ1Q99689 392 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 ARHGEF10LQ9HCE6 1279 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 CASP8AP2Q9UKL3 1982 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 PCNTO95613 3336 aa12.57□□□□□ -0.4
MTHFD1-214ENST00000556771 PCP11498 1178 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 AKR1B1P15121 316 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 RASA1P20936 1047 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 GUCY1A2P33402 732 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 NT5C2P49902 561 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 SP3Q02447 781 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 ICA1Q05084 483 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 SEPT2Q15019 361 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 BMP2KLQ5H9B9 411 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 ZNF444Q8N0Y2 327 aaPredicted RBP12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 DSCC1Q9BVC3 393 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
MTHFD1-214ENST00000556771 FGAP02671 866 aa12.55□□□□□ -0.4
MTHFD1-214ENST00000556771 OSBPP22059 807 aa12.55□□□□□ -0.4
MTHFD1-214ENST00000556771 CHMLP26374 656 aa12.55□□□□□ -0.4
MTHFD1-214ENST00000556771 PKN2Q16513 984 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-214ENST00000556771 CTU1Q7Z7A3 348 aaKnown RBP12.55□□□□□ -0.4
MTHFD1-214ENST00000556771 CTNNA3Q9UI47 895 aa12.55□□□□□ -0.4
MTHFD1-214ENST00000556771 ADGRA2Q96PE1 1338 aa12.55□□□□□ -0.4
MTHFD1-214ENST00000556771 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
MTHFD1-214ENST00000556771 GREB1LQ9C091 1923 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 SMIM22K7EJ46 135 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 GCLCP48506 637 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 IRX3P78415 501 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 KIF22Q14807 665 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 TREML2Q5T2D2 321 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 SMCR8Q8TEV9 937 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 GTF3C2Q8WUA4 911 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 LPAR1Q92633 364 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 TMX2Q9Y320 296 aa12.54□□□□□ -0.4
MTHFD1-214ENST00000556771 ORC4O43929 436 aa12.53□□□□□ -0.4
MTHFD1-214ENST00000556771 GNRH1P01148 92 aa12.53□□□□□ -0.4
MTHFD1-214ENST00000556771 FGRP09769 529 aa12.53□□□□□ -0.4
MTHFD1-214ENST00000556771 SPDYE1Q8NFV5 336 aaPredicted RBP12.53□□□□□ -0.4
MTHFD1-214ENST00000556771 ACER1Q8TDN7 264 aa12.53□□□□□ -0.4
MTHFD1-214ENST00000556771 ASCC2Q9H1I8 757 aaPredicted RBP12.53□□□□□ -0.4
MTHFD1-214ENST00000556771 RNF41Q9H4P4 317 aaPredicted RBP12.53□□□□□ -0.4
MTHFD1-214ENST00000556771 NYAP2Q9P242 653 aa12.53□□□□□ -0.4
MTHFD1-214ENST00000556771 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 TSPY3P0CV98 308 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 TSPY8P0CW00 308 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 CYP2C8P10632 490 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 BCRP11274 1271 aa12.52□□□□□ -0.41
MTHFD1-214ENST00000556771 VCAM1P19320 739 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms