RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CABP5Q9NP86 173 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 TMOD4Q9NZQ9 345 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 HTTP42858 3142 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 ROBO3Q96MS0 1386 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 PEX10O60683 326 aa12.42□□□□□ -0.42
SNX6-208ENST00000556712 GNAT2P19087 354 aa12.42□□□□□ -0.42
SNX6-208ENST00000556712 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
SNX6-208ENST00000556712 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
SNX6-208ENST00000556712 IFNL3Q8IZI9 196 aa12.42□□□□□ -0.42
SNX6-208ENST00000556712 ANKRD13CQ8N6S4 541 aa12.42□□□□□ -0.42
SNX6-208ENST00000556712 TRIM47Q96LD4 638 aa12.42□□□□□ -0.42
SNX6-208ENST00000556712 ASCC2Q9H1I8 757 aaPredicted RBP12.42□□□□□ -0.42
SNX6-208ENST00000556712 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
SNX6-208ENST00000556712 PTPN22Q9Y2R2 807 aa12.42□□□□□ -0.42
SNX6-208ENST00000556712 PTCH2Q9Y6C5 1203 aa12.42□□□□□ -0.42
SNX6-208ENST00000556712 PARP14Q460N5 1801 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 MYH4Q9Y623 1939 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 A0A1W2PRG0 241 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 C19orf81C9J6K1 198 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 SOX10P56693 466 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 SBK1Q52WX2 424 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 GIMAP6Q6P9H5 292 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 USP17L2Q6R6M4 530 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 TMEM179Q6ZVK1 233 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
SNX6-208ENST00000556712 A0A0G2JMZ2 1700 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 LAMA4Q16363 1823 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 PATL2C9JE40 543 aaKnown RBP12.4□□□□□ -0.42
SNX6-208ENST00000556712 PRDM1O75626 825 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 VCAM1P19320 739 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 PSMC4P43686 418 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 IRX3P78415 501 aaPredicted RBP12.4□□□□□ -0.42
SNX6-208ENST00000556712 ICA1Q05084 483 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNX6-208ENST00000556712 KIF22Q14807 665 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 ZNF589Q86UQ0 364 aaPredicted RBP12.4□□□□□ -0.42
SNX6-208ENST00000556712 C12orf42Q96LP6 360 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 NAPBQ9H115 298 aa12.4□□□□□ -0.42
SNX6-208ENST00000556712 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 RLFQ13129 1914 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 RBBP6Q7Z6E9 1792 aaKnown RBP12.39□□□□□ -0.43
SNX6-208ENST00000556712 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
SNX6-208ENST00000556712 GSPT1P15170 499 aaKnown RBP12.39□□□□□ -0.43
SNX6-208ENST00000556712 RASA1P20936 1047 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 OSBPP22059 807 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 KIAA1755Q5JYT7 1200 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 P2RX7Q99572 595 aaKnown RBP12.39□□□□□ -0.43
SNX6-208ENST00000556712 NACAP1Q9BZK3 213 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 KIAA1683Q9H0B3 1180 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 HELLSQ9NRZ9 838 aa12.39□□□□□ -0.43
SNX6-208ENST00000556712 DOCK3Q8IZD9 2030 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 SDSP20132 328 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 HOXA7P31268 230 aaPredicted RBP12.38□□□□□ -0.43
SNX6-208ENST00000556712 USP14P54578 494 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 FCGRTP55899 365 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 HERVK_113P62684 666 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 CTDSPL2Q05D32 466 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 PPARAQ07869 468 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 FAM110CQ1W6H9 321 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 SIAH1Q8IUQ4 282 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 SPICE1Q8N0Z3 855 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 CCDC17Q96LX7 622 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 PAGR1Q9BTK6 254 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNX6-208ENST00000556712 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
SNX6-208ENST00000556712 MKNK2Q9HBH9 465 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 ARHGEF10LQ9HCE6 1279 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 TXNRD2Q9NNW7 524 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 GABRQQ9UN88 632 aa12.38□□□□□ -0.43
SNX6-208ENST00000556712 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 MYPNQ86TC9 1320 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
SNX6-208ENST00000556712 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
SNX6-208ENST00000556712 PRKCZQ05513 592 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 MCMDC2Q4G0Z9 681 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 TTC22Q5TAA0 569 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 SKAP1Q86WV1 359 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 SH3TC2Q8TF17 1288 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 SRRDQ9UH36 339 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
SNX6-208ENST00000556712 USP17L15C9J2P7 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 USP17L13C9JLJ4 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 USP17L11C9JVI0 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 USP17L18D6R9N7 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 USP17L22D6RA61 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 USP17L17D6RBQ6 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 USP17L19D6RCP7 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 USP17L20D6RJB6 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 TNPO2O14787 897 aaKnown RBP12.36□□□□□ -0.43
SNX6-208ENST00000556712 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
SNX6-208ENST00000556712 HSPD1P10809 573 aaKnown RBP12.36□□□□□ -0.43
SNX6-208ENST00000556712 GCLCP48506 637 aaPredicted RBP12.36□□□□□ -0.43
SNX6-208ENST00000556712 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 ARHGEF6Q15052 776 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms