RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 C12orf42Q96LP6 360 aa13.79□□□□□ -0.2
SLIRP-206ENST00000556375 NACAP1Q9BZK3 213 aa13.79□□□□□ -0.2
SLIRP-206ENST00000556375 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
SLIRP-206ENST00000556375 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
SLIRP-206ENST00000556375 AKR1B1P15121 316 aa13.78□□□□□ -0.2
SLIRP-206ENST00000556375 OSBPP22059 807 aa13.78□□□□□ -0.2
SLIRP-206ENST00000556375 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-206ENST00000556375 IFNL3Q8IZI9 196 aa13.78□□□□□ -0.2
SLIRP-206ENST00000556375 ACER1Q8TDN7 264 aa13.78□□□□□ -0.2
SLIRP-206ENST00000556375 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
SLIRP-206ENST00000556375 NAPBQ9H115 298 aa13.78□□□□□ -0.2
SLIRP-206ENST00000556375 ASCC2Q9H1I8 757 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-206ENST00000556375 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
SLIRP-206ENST00000556375 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
SLIRP-206ENST00000556375 A0A0D9SFI3 127 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 MINDY4BA8MYZ0 360 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 GNRH1P01148 92 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 PDE4AP27815 886 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-206ENST00000556375 IRX3P78415 501 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-206ENST00000556375 ICA1Q05084 483 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.21
SLIRP-206ENST00000556375 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 FAM110CQ1W6H9 321 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 RILPL2Q969X0 211 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 FAM227BQ96M60 508 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
SLIRP-206ENST00000556375 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
SLIRP-206ENST00000556375 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 FOXP2O15409 715 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 VCAM1P19320 739 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 PSMC4P43686 418 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 NMIQ13287 307 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-206ENST00000556375 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 SH2D4AQ9H788 454 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 ZNF287Q9HBT7 754 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
SLIRP-206ENST00000556375 CENPFP49454 3210 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 PLIN4Q96Q06 1357 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 ZMYM6O95789 1325 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 CCDC171Q6TFL3 1326 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 RLFQ13129 1914 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 SDSP20132 328 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 RASA1P20936 1047 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 CTGFP29279 349 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 PRMT2P55345 433 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 FCGRTP55899 365 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 CLEC10AQ8IUN9 316 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 ANKRD13CQ8N6S4 541 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 GTF3C2Q8WUA4 911 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-206ENST00000556375 MKNK2Q9HBH9 465 aa13.75□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L15C9J2P7 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 HIP1O00291 1037 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
SLIRP-206ENST00000556375 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
SLIRP-206ENST00000556375 HERVK_113P62684 666 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 PPARAQ07869 468 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
SLIRP-206ENST00000556375 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 DIAPH3Q9NSV4 1193 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 MORF4L1Q9UBU8 362 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 SRRDQ9UH36 339 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 TMX2Q9Y320 296 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 PTCH2Q9Y6C5 1203 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 DOCK3Q8IZD9 2030 aa13.74□□□□□ -0.21
SLIRP-206ENST00000556375 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
SLIRP-206ENST00000556375 ECM2O94769 699 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-206ENST00000556375 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
SLIRP-206ENST00000556375 HOXD10P28358 340 aa13.73□□□□□ -0.21
SLIRP-206ENST00000556375 MFAP1P55081 439 aaKnown RBP13.73□□□□□ -0.21
SLIRP-206ENST00000556375 PDE4BQ07343 736 aa13.73□□□□□ -0.21
SLIRP-206ENST00000556375 ALX1Q15699 326 aa13.73□□□□□ -0.21
SLIRP-206ENST00000556375 SIAH1Q8IUQ4 282 aa13.73□□□□□ -0.21
SLIRP-206ENST00000556375 STK11IPQ8N1F8 1099 aa13.73□□□□□ -0.21
SLIRP-206ENST00000556375 LPAR1Q92633 364 aa13.73□□□□□ -0.21
SLIRP-206ENST00000556375 ARMC5Q96C12 935 aa13.73□□□□□ -0.21
SLIRP-206ENST00000556375 P2RX7Q99572 595 aaKnown RBP13.73□□□□□ -0.21
SLIRP-206ENST00000556375 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■□□□□ 10.5
SLIRP-206ENST00000556375 PLXNB2O15031 1838 aa13.72□□□□□ -0.21
SLIRP-206ENST00000556375 TNPO2O14787 897 aaKnown RBP13.72□□□□□ -0.21
SLIRP-206ENST00000556375 PRDM1O75626 825 aa13.72□□□□□ -0.21
SLIRP-206ENST00000556375 EEF2P13639 858 aaKnown RBP13.72□□□□□ -0.21
SLIRP-206ENST00000556375 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
SLIRP-206ENST00000556375 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms