RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 RBM28Q9NW13 759 aaKnown RBP10.77□□□□□ -0.69
ACTN1-218ENST00000556343 MTMR4Q9NYA4 1195 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 NYAP2Q9P242 653 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 CLIP2Q9UDT6 1046 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 PLIN4Q96Q06 1357 aa10.77□□□□□ -0.69
ACTN1-218ENST00000556343 MYH1P12882 1939 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 BAZ2AQ9UIF9 1905 aaKnown RBP10.76□□□□□ -0.69
ACTN1-218ENST00000556343 GOLGA8AA7E2F4 631 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 GH2P01242 217 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 PDIA4P13667 645 aaKnown RBP10.76□□□□□ -0.69
ACTN1-218ENST00000556343 MAP3K9P80192 1104 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 ICA1Q05084 483 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 STK3Q13188 491 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 CUL4AQ13619 759 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 TTLL12Q14166 644 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-218ENST00000556343 ME3Q16798 604 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 ZNF654Q8IZM8 581 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 PNMA1Q8ND90 353 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 CTCFLQ8NI51 663 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-218ENST00000556343 ZNF526Q8TF50 670 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-218ENST00000556343 NUP133Q8WUM0 1156 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 CEP95Q96GE4 821 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 MAP3K14Q99558 947 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
ACTN1-218ENST00000556343 DNAJC18Q9H819 358 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 AS3MTQ9HBK9 375 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 GPBP1L1Q9HC44 474 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-218ENST00000556343 IL17RBQ9NRM6 502 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 ZNF112Q9UJU3 913 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 SCAF8Q9UPN6 1271 aaKnown RBP10.76□□□□□ -0.69
ACTN1-218ENST00000556343 SMC3Q9UQE7 1217 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 SCN4AP35499 1836 aa10.76□□□□□ -0.69
ACTN1-218ENST00000556343 WDR90Q96KV7 1748 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 LAMA4Q16363 1823 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 IGKV6D-41A0A0C4DH26 115 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 UNCXA6NJT0 531 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 FAM196BA6NMK8 535 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 USP17L5A8MUK1 530 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 ADM5C9JUS6 153 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 GDF11O95390 407 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 CD2BP2O95400 341 aaKnown RBP10.75□□□□□ -0.69
ACTN1-218ENST00000556343 NOVP48745 357 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 HMGN5P82970 282 aaKnown RBP10.75□□□□□ -0.69
ACTN1-218ENST00000556343 AKAP17AQ02040 695 aaKnown RBP10.75□□□□□ -0.69
ACTN1-218ENST00000556343 SEPT2Q15019 361 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 RTN1Q16799 776 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 APOA5Q6Q788 366 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 CCDC83Q8IWF9 413 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 FANCBQ8NB91 859 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 MKL1Q969V6 931 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 CDCA5Q96FF9 252 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 WRNIP1Q96S55 665 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 TMEM47Q9BQJ4 181 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 GLIS2Q9BZE0 524 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-218ENST00000556343 GOPCQ9HD26 462 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 BRPF3Q9ULD4 1205 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 ZBTB21Q9ULJ3 1066 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 CSADQ9Y600 493 aa10.75□□□□□ -0.69
ACTN1-218ENST00000556343 PHF20L1A8MW92 1017 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 NMT2O60551 498 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 EEF2P13639 858 aaKnown RBP10.74□□□□□ -0.69
ACTN1-218ENST00000556343 FKBP1BP68106 108 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 CCT2P78371 535 aaKnown RBP10.74□□□□□ -0.69
ACTN1-218ENST00000556343 PRAMEF18Q5VWM3 479 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 CHADLQ6NUI6 762 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 SCYL3Q8IZE3 742 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 FAM184AQ8NB25 1140 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 WASF1Q92558 559 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 KLRG1Q96E93 195 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 NMRK2Q9NPI5 230 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 GPHNQ9NQX3 736 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-218ENST00000556343 ADAMTSL1Q8N6G6 1762 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 FOCADQ5VW36 1801 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 ECM29Q5VYK3 1845 aa10.74□□□□□ -0.69
ACTN1-218ENST00000556343 LAMB1P07942 1786 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 USP2O75604 605 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-218ENST00000556343 PARP1P09874 1014 aaKnown RBP10.73□□□□□ -0.69
ACTN1-218ENST00000556343 PDCP20941 246 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 USP14P54578 494 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 SCRN1Q12765 414 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 ASPRV1Q53RT3 343 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 NOL9Q5SY16 702 aaKnown RBP10.73□□□□□ -0.69
ACTN1-218ENST00000556343 GPATCH4Q5T3I0 446 aaKnown RBP10.73□□□□□ -0.69
ACTN1-218ENST00000556343 MAP1SQ66K74 1059 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-218ENST00000556343 RCSD1Q6JBY9 416 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 TRIM22Q8IYM9 498 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 ANKRD13AQ8IZ07 590 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 C2orf69Q8N8R5 385 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 NECAB1Q8N987 351 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 SPRYD3Q8NCJ5 442 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 DCAF4Q8WV16 495 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 FEZ1Q99689 392 aa10.73□□□□□ -0.69
ACTN1-218ENST00000556343 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.73□□□□□ -0.69
ACTN1-218ENST00000556343 RBM27Q9P2N5 1060 aaKnown RBP10.73□□□□□ -0.69
ACTN1-218ENST00000556343 RAD21O60216 631 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 SMARCA1P28370 1054 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms