RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 MBTPS1Q14703 1052 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 MORC1Q86VD1 984 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 SYNE4Q8N205 404 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 DNAJB12Q9NXW2 375 aaKnown RBP6.53□□□□□ -1.36
ATXN3-239ENST00000556315 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-239ENST00000556315 ZNF541Q9H0D2 1346 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 CARNS1A5YM72 827 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 PRMT3O60678 531 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 BRD1O95696 1058 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 H2AFB1P0C5Y9 115 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 H2AFB2P0C5Z0 115 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 ATP2B4P23634 1241 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 IARSP41252 1262 aaKnown RBP6.52□□□□□ -1.37
ATXN3-239ENST00000556315 EIF6P56537 245 aaKnown RBP6.52□□□□□ -1.37
ATXN3-239ENST00000556315 GRM1Q13255 1194 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 CCINQ13939 588 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 CYP4F22Q6NT55 531 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 PSAPL1Q6NUJ1 521 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 CLEC4GQ6UXB4 293 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 NBPF5PQ86XG9 351 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-239ENST00000556315 NUDT8Q8WV74 236 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 PANK3Q9H999 370 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 JPH1Q9HDC5 661 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-239ENST00000556315 NAGPAQ9UK23 515 aa6.52□□□□□ -1.37
ATXN3-239ENST00000556315 RNF123Q5XPI4 1314 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 SBF1O95248 1867 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 MYH14Q7Z406 1995 aaKnown RBP6.51□□□□□ -1.37
ATXN3-239ENST00000556315 PATL2C9JE40 543 aaKnown RBP6.51□□□□□ -1.37
ATXN3-239ENST00000556315 A1BGP04217 495 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 WEE1P30291 646 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 INPP5BP32019 993 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 RAC1P63000 192 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 NRG1Q02297 640 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-239ENST00000556315 TBC1D8BQ0IIM8 1120 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 DGKZQ13574 1117 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
ATXN3-239ENST00000556315 PRSS36Q5K4E3 855 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 CST9Q5W186 159 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 ZNF790Q6PG37 636 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 USP50Q70EL3 339 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-239ENST00000556315 TXNRD3Q86VQ6 643 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 ZNF496Q96IT1 587 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-239ENST00000556315 IGFLR1Q9H665 355 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 C11orf16Q9NQ32 467 aa6.51□□□□□ -1.37
ATXN3-239ENST00000556315 CXXC1Q9P0U4 656 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-239ENST00000556315 AOC2O75106 756 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 MAP3K6O95382 1288 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 NFKB1P19838 968 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 OCLNQ16625 522 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 SHISA2Q6UWI4 295 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 FMR1NBQ8N0W7 255 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-239ENST00000556315 VTI1AQ96AJ9 217 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 HHIPL1Q96JK4 782 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 PRIMPOLQ96LW4 560 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 PNMA5Q96PV4 448 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 PSMG3-AS1Q96PY0 264 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 FMNL2Q96PY5 1086 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 PSMD1Q99460 953 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-239ENST00000556315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.5□□□□□ -1.37
ATXN3-239ENST00000556315 MTMR7Q9Y216 660 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 ZNF652Q9Y2D9 606 aa6.5□□□□□ -1.37
ATXN3-239ENST00000556315 COL5A3P25940 1745 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-239ENST00000556315 HEG1Q9ULI3 1381 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 TRAF5O00463 557 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 LGR5O75473 907 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 RGS9O75916 674 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-239ENST00000556315 HMOX1P09601 288 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 EPB42P16452 691 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 EPS15P42566 896 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
ATXN3-239ENST00000556315 TEFQ10587 303 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 GRIK5Q16478 980 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 PCSK7Q16549 785 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 ARTNQ5T4W7 220 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 OLFM4Q6UX06 510 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 SAPCD2Q86UD0 394 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 DMRTC2Q8IXT2 367 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-239ENST00000556315 FRRS1LQ9P0K9 344 aa6.49□□□□□ -1.37
ATXN3-239ENST00000556315 GNAT3A8MTJ3 354 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 CELF2O95319 508 aaKnown RBP6.48□□□□□ -1.37
ATXN3-239ENST00000556315 IDH3AP50213 366 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 KCNA1Q09470 495 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 DTWD1Q8N5C7 304 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 TRPM4Q8TD43 1214 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 TTC9Q92623 222 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 COL26A1Q96A83 441 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 LPIN3Q9BQK8 851 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 ADARB2Q9NS39 739 aaKnown RBP6.48□□□□□ -1.37
ATXN3-239ENST00000556315 KLK14Q9P0G3 267 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 ZFATQ9P243 1243 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-239ENST00000556315 KNSTRNQ9Y448 316 aa6.48□□□□□ -1.37
ATXN3-239ENST00000556315 ADAMTS7Q9UKP4 1686 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms