RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
GABRB3-210ENST00000556166 NEK1Q96PY6 1258 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 WDR18Q9BV38 432 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 KANSL2Q9H9L4 492 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 TCP11L1Q9NUJ3 509 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 LAMB1P07942 1786 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 PLIN4Q96Q06 1357 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 IRF6O14896 467 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 EEF2P13639 858 aaKnown RBP13.54□□□□□ -0.24
GABRB3-210ENST00000556166 MCCP23508 829 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 ECE1P42892 770 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
GABRB3-210ENST00000556166 PPATQ06203 517 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 TRDNQ13061 729 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
GABRB3-210ENST00000556166 SPP2Q13103 211 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 KRT32Q14532 448 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 IGDCC4Q8TDY8 1250 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 ZIC5Q96T25 663 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 SENP2Q9HC62 589 aa13.54□□□□□ -0.24
GABRB3-210ENST00000556166 SLC10A3P09131 477 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 PPIL2Q13356 520 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 DGKZQ13574 1117 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 SEC23AQ15436 765 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 KIAA1755Q5JYT7 1200 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 ZNF280CQ8ND82 737 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 MS4A4AQ96JQ5 239 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 TBC1D32Q96NH3 1257 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 ZSCAN10Q96SZ4 725 aaPredicted RBP13.53□□□□□ -0.24
GABRB3-210ENST00000556166 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 NYAP2Q9P242 653 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
GABRB3-210ENST00000556166 LAMA4Q16363 1823 aa13.52□□□□□ -0.24
GABRB3-210ENST00000556166 TRIM75PA6NK02 468 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 PRC1O43663 620 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 ANAPC15P60006 121 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 ICA1Q05084 483 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 MOGSQ13724 837 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 DHX32Q7L7V1 743 aaKnown RBP13.52□□□□□ -0.25
GABRB3-210ENST00000556166 RALYLQ86SE5 291 aaKnown RBP13.52□□□□□ -0.25
GABRB3-210ENST00000556166 ENAHQ8N8S7 591 aaPredicted RBP13.52□□□□□ -0.25
GABRB3-210ENST00000556166 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 MKL1Q969V6 931 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 LRRC2Q9BYS8 371 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 TM6SF1Q9BZW5 370 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 KCNH4Q9UQ05 1017 aa13.52□□□□□ -0.25
GABRB3-210ENST00000556166 OTOFQ9HC10 1997 aa13.51□□□□□ -0.25
GABRB3-210ENST00000556166 CASTP20810 708 aaKnown RBP13.51□□□□□ -0.25
GABRB3-210ENST00000556166 MCM5P33992 734 aa13.51□□□□□ -0.25
GABRB3-210ENST00000556166 NT5C2P49902 561 aa13.51□□□□□ -0.25
GABRB3-210ENST00000556166 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
GABRB3-210ENST00000556166 CCDC102AQ96A19 550 aa13.51□□□□□ -0.25
GABRB3-210ENST00000556166 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
GABRB3-210ENST00000556166 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
GABRB3-210ENST00000556166 CXCL11O14625 94 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 IFIT3O14879 490 aaKnown RBP13.5□□□□□ -0.25
GABRB3-210ENST00000556166 AOC2O75106 756 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 TTLL1O95922 423 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 VEGFBP49765 207 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 BACE1P56817 501 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 MTMR2Q13614 643 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 CAPNS2Q96L46 248 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 TMEM47Q9BQJ4 181 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 TMX2Q9Y320 296 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 TNKSO95271 1327 aa13.5□□□□□ -0.25
GABRB3-210ENST00000556166 USP17L10C9JJH3 530 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 PSMA5P28066 241 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 GRM1Q13255 1194 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 ZYXQ15942 572 aaKnown RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 BLOC1S2Q6QNY1 142 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 PAXIP1Q6ZW49 1069 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 RUFY3Q7L099 469 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 IQCA1Q86XH1 822 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 TTC14Q96N46 770 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 PTPN18Q99952 460 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 KIAA1683Q9H0B3 1180 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 LY9Q9HBG7 655 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 GREB1LQ9C091 1923 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 A0A0G2JLL6 359 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 SH2B2O14492 632 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 HMGCS2P54868 508 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 TMEM67Q5HYA8 995 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 SH3D19Q5HYK7 790 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 RASGRP2Q7LDG7 609 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 PRRT2Q7Z6L0 340 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-210ENST00000556166 DNAJC5GQ8N7S2 189 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 BRI3BPQ8WY22 251 aa13.49□□□□□ -0.25
GABRB3-210ENST00000556166 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms