RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 C17orf99Q6UX52 265 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 FASTKD5Q7L8L6 764 aaKnown RBP8.19□□□□□ -1.1
PSEN1-216ENST00000556066 SH3RF3Q8TEJ3 882 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-216ENST00000556066 ZNF333Q96JL9 665 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 TRIM47Q96LD4 638 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 PARK7Q99497 189 aaKnown RBP8.19□□□□□ -1.1
PSEN1-216ENST00000556066 CCDC8Q9H0W5 538 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-216ENST00000556066 GPR108Q9NPR9 543 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 ZBED9Q6R2W3 1325 aa8.19□□□□□ -1.1
PSEN1-216ENST00000556066 A0A0G2JLL6 359 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 MAP4K4O95819 1239 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 GNRH1P01148 92 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 CYP2E1P05181 493 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 HOXD10P28358 340 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 CTGFP29279 349 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 ZAP70P43403 619 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 MAP3K10Q02779 954 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 Q6ZNB5 142 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 PRRT2Q7Z6L0 340 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 MAPKAPK5Q8IW41 473 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 RAET1EQ8TD07 263 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 SMCR8Q8TEV9 937 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 TGFBRAP1Q8WUH2 860 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 EPAS1Q99814 870 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 OSBPL5Q9H0X9 879 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 TLR7Q9NYK1 1049 aaKnown RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 BIN2Q9UBW5 565 aaPredicted RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 EXOC6BQ9Y2D4 811 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 NOP58Q9Y2X3 529 aaKnown RBP8.18□□□□□ -1.1
PSEN1-216ENST00000556066 AFG3L2Q9Y4W6 797 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 PCDHGA10Q9Y5H3 936 aa8.18□□□□□ -1.1
PSEN1-216ENST00000556066 SIPA1L1O43166 1804 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 APBB1O00213 710 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 IDH1O75874 414 aaKnown RBP8.17□□□□□ -1.1
PSEN1-216ENST00000556066 CYP7A1P22680 504 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 PRMT2P55345 433 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 FCGRTP55899 365 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 SPP2Q13103 211 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 CEP85Q6P2H3 762 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 ADGRA1Q86SQ6 560 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 AACSQ86V21 672 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 EAF2Q96CJ1 260 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-216ENST00000556066 TRIM34Q9BYJ4 488 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 PIH1D3Q9NQM4 214 aaKnown RBP8.17□□□□□ -1.1
PSEN1-216ENST00000556066 SRRDQ9UH36 339 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
PSEN1-216ENST00000556066 NDUFB9Q9Y6M9 179 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 MYPNQ86TC9 1320 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 ADGRA2Q96PE1 1338 aa8.17□□□□□ -1.1
PSEN1-216ENST00000556066 LOC285556D6RIA3 1793 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 GPR37O15354 613 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 COL2A1P02458 1487 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-216ENST00000556066 BCRP11274 1271 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 GRK4P32298 578 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 CAP2P40123 477 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 HMGCS2P54868 508 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 DYNLL1P63167 89 aaKnown RBP8.16□□□□□ -1.1
PSEN1-216ENST00000556066 PRKCZQ05513 592 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 RRP1BQ14684 758 aaKnown RBP8.16□□□□□ -1.1
PSEN1-216ENST00000556066 TREML2Q5T2D2 321 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 ERC1Q8IUD2 1116 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 CRACR2BQ8N4Y2 399 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-216ENST00000556066 MIGA1Q8NAN2 632 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 ZNF280CQ8ND82 737 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 ZNF512BQ96KM6 892 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-216ENST00000556066 DHX36Q9H2U1 1008 aaKnown RBP8.16□□□□□ -1.1
PSEN1-216ENST00000556066 IL1RAPL2Q9NP60 686 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 PI4KBQ9UBF8 816 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 HERC5Q9UII4 1024 aaKnown RBP8.16□□□□□ -1.1
PSEN1-216ENST00000556066 PALD1Q9ULE6 856 aa8.16□□□□□ -1.1
PSEN1-216ENST00000556066 FLT1P17948 1338 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 USP17L5A8MUK1 530 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 H0YGN5 161 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 MS4A1P11836 297 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 FOSBP53539 338 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 PPP4CP60510 307 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 MTFR1Q15390 333 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 ANKRD13CQ8N6S4 541 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 MAGEB6Q8N7X4 407 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 AS3MTQ9HBK9 375 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 GABRQQ9UN88 632 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 AGTPBP1Q9UPW5 1226 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 COG6Q9Y2V7 657 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 SLC45A1Q9Y2W3 748 aa8.15□□□□□ -1.1
PSEN1-216ENST00000556066 MYH8P13535 1937 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 BHMG1C9JSJ3 638 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-216ENST00000556066 TNPO2O14787 897 aaKnown RBP8.14□□□□□ -1.11
PSEN1-216ENST00000556066 GDF11O95390 407 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 HLA-DOAP06340 250 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 ASNSP08243 561 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 CCL5P13501 91 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 USP5P45974 858 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 FLT3LGP49771 235 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 UBXN2AP68543 259 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 MAP3K12Q12852 859 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 MTMR2Q13614 643 aa8.14□□□□□ -1.11
PSEN1-216ENST00000556066 SHROOM1Q2M3G4 852 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-216ENST00000556066 HSP90AB4PQ58FF6 505 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms