RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 CCAR1Q8IX12 1150 aaKnown RBP9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 CCDC17Q96LX7 622 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 DCP1AQ9NPI6 582 aaPredicted RBP9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 COLQQ9Y215 455 aaPredicted RBP9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 COG6Q9Y2V7 657 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 ZNF532Q9HCE3 1301 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 STRNO43815 780 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 SHMT1P34896 483 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 ADD2P35612 726 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 RGS2P41220 211 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 FXR1P51114 621 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 COG2Q14746 738 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 MORN1Q5T089 497 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 GPR142Q7Z601 462 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 PLEKHH3Q7Z736 793 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 HAUS7Q99871 368 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 NBPF3Q9H094 633 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 TXNRD2Q9NNW7 524 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 PAG1Q9NWQ8 432 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 MCM9Q9NXL9 1143 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 OGDHLQ9ULD0 1010 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
PTCSC3-201ENST00000556013 ZSWIM8A7E2V4 1837 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 LOC285556D6RIA3 1793 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 GOLIM4O00461 696 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 EVI5O60447 810 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 HOXC6P09630 235 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 CYP2B6P20813 491 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 GUCY1A2P33402 732 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 RAB3GAP1Q15042 981 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 TMEM179Q6ZVK1 233 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 LPAR1Q92633 364 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 EDC3Q96F86 508 aaKnown RBP9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 PAWRQ96IZ0 340 aaKnown RBP9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 FEZ1Q99689 392 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 LRRCC1Q9C099 1032 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 PRO3102Q9H379 93 aa9.4□□□□□ -0.9
PTCSC3-201ENST00000556013 MAST2Q6P0Q8 1798 aa9.4□□□□□ -0.91
PTCSC3-201ENST00000556013 CEP290O15078 2479 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 SLC15A5A6NIM6 579 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 MSCO60682 206 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 VCAM1P19320 739 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 PTPREP23469 700 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 BMP8BP34820 402 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 MAP2K5Q13163 448 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 C12orf60Q5U649 245 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 GIMAP6Q6P9H5 292 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 AMOTL1Q8IY63 956 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 MB21D1Q8N884 522 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 SHCBP1Q8NEM2 672 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 ACER1Q8TDN7 264 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 TRIB2Q92519 343 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 DDRGK1Q96HY6 314 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 DNAJC2Q99543 621 aaKnown RBP9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 PORCNQ9H237 461 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 BOLA2Q9H3K6 86 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 DCTPP1Q9H773 170 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 SH2D4AQ9H788 454 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 SIPA1L1O43166 1804 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 FOCADQ5VW36 1801 aa9.39□□□□□ -0.91
PTCSC3-201ENST00000556013 ATAD5Q96QE3 1844 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 CNMDO75829 334 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 CACNB2Q08289 660 aaPredicted RBP9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 SEPT2Q15019 361 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 MFSD14CQ5VZR4 134 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 SDR42E1Q8WUS8 393 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 APBA2Q99767 749 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 PAGR1Q9BTK6 254 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 MYH1P12882 1939 aa9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 MYO5AQ9Y4I1 1855 aaKnown RBP9.38□□□□□ -0.91
PTCSC3-201ENST00000556013 CDK5RAP2Q96SN8 1893 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 USP17L12C9JPN9 530 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 USP17L21D6R901 530 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 IGHA2P01877 340 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 DSG3P32926 999 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 CDK8P49336 464 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 MNX1P50219 401 aaPredicted RBP9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 GRB14Q14449 540 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 LRRFIP1Q32MZ4 808 aaKnown RBP9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 SBK1Q52WX2 424 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 LHX8Q68G74 356 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 CHRDL2Q6WN34 429 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 C16orf86Q6ZW13 317 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 ABRAQ8N0Z2 381 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 LCORLQ8N3X6 602 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 MROH8Q9H579 483 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 C11orf49Q9H6J7 331 aa9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 RPAP3Q9H6T3 665 aaPredicted RBP9.37□□□□□ -0.91
PTCSC3-201ENST00000556013 VCPKMTQ9H867 229 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms