RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 SLC52A2Q9HAB3 445 aa8.78□□□□□ -1
CHD8-209ENST00000555935 A1CFQ9NQ94 594 aaKnown RBP8.78□□□□□ -1
CHD8-209ENST00000555935 GOLGA6BA6NDN3 693 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 KIF1CO43896 1103 aaKnown RBP8.77□□□□□ -1.01
CHD8-209ENST00000555935 NDUFA10O95299 355 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 SNRPA1P09661 255 aaKnown RBP8.77□□□□□ -1.01
CHD8-209ENST00000555935 ATP6V1AP38606 617 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 PSEN1P49768 467 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 FKBP4Q02790 459 aaKnown RBP eCLIP8.77□□□□□ -1.01
CHD8-209ENST00000555935 CCNI2Q6ZMN8 369 aaPredicted RBP8.77□□□□□ -1.01
CHD8-209ENST00000555935 DIS3L2Q8IYB7 885 aaKnown RBP8.77□□□□□ -1.01
CHD8-209ENST00000555935 NUP88Q99567 741 aaPredicted RBP8.77□□□□□ -1.01
CHD8-209ENST00000555935 SLF1Q9BQI6 1058 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 SELENOOQ9BVL4 669 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 AATFQ9NY61 560 aaKnown RBP eCLIP8.77□□□□□ -1.01
CHD8-209ENST00000555935 FAM184BQ9ULE4 1060 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 EPN1Q9Y6I3 576 aaPredicted RBP8.77□□□□□ -1.01
CHD8-209ENST00000555935 NID2Q14112 1375 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 ATP5J2-PTCD1G3V325 749 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 AGPSO00116 658 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 N4BP3O15049 544 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 GPAA1O43292 621 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 OPA1O60313 960 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
CHD8-209ENST00000555935 ABL1P00519 1130 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 CD44P16070 742 aaKnown RBP8.77□□□□□ -1.01
CHD8-209ENST00000555935 IFNAR1P17181 557 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 MNAT1P51948 309 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 GRIN1Q05586 938 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 KLHL10Q6JEL2 608 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 NFXL1Q6ZNB6 911 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 B4GALNT4Q76KP1 1039 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 CYB5R4Q7L1T6 521 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 MICU3Q86XE3 530 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 AMOTL1Q8IY63 956 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 MMS19Q96T76 1030 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 SLC26A6Q9BXS9 759 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 PHF8Q9UPP1 1060 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 BCL9LQ86UU0 1499 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 C5P01031 1676 aa8.77□□□□□ -1.01
CHD8-209ENST00000555935 CAMTA1Q9Y6Y1 1673 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 ARHGAP23Q9P227 1491 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 ANO9A1A5B4 782 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 BTBD18B2RXH4 712 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 PPP1R3GB7ZBB8 358 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 CCDC172P0C7W6 258 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 LIFRP42702 1097 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 STX17P56962 302 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 PRPF38AQ8NAV1 312 aaKnown RBP8.76□□□□□ -1.01
CHD8-209ENST00000555935 BCAS4Q8TDM0 211 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 SH3GL2Q99962 352 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.76□□□□□ -1.012e-8■■■□□ 19.2
CHD8-209ENST00000555935 NBPF3Q9H094 633 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 PUS7LQ9H0K6 701 aaKnown RBP8.76□□□□□ -1.01
CHD8-209ENST00000555935 SEC31BQ9NQW1 1179 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 STRN4Q9NRL3 753 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
CHD8-209ENST00000555935 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 FBXO3Q9UK99 471 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 GUCA1BQ9UMX6 200 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 AFDNP55196 1824 aaKnown RBP8.76□□□□□ -1.01
CHD8-209ENST00000555935 EPB41P11171 864 aaKnown RBP8.76□□□□□ -1.01
CHD8-209ENST00000555935 KRT9P35527 623 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 KRT83P78385 493 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 SLC39A6Q13433 755 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 KRT31Q15323 416 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 TBC1D10CQ8IV04 446 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 TRIM22Q8IYM9 498 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 IGDCC4Q8TDY8 1250 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 AENQ8WTP8 325 aaKnown RBP8.76□□□□□ -1.01
CHD8-209ENST00000555935 RIN2Q8WYP3 895 aaPredicted RBP8.76□□□□□ -1.01
CHD8-209ENST00000555935 CSRNP2Q9H175 543 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 DONSONQ9NYP3 566 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 CEP83Q9Y592 693 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 RGPD2P0DJD1 1756 aa8.76□□□□□ -1.01
CHD8-209ENST00000555935 GRIN2DO15399 1336 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 CLGNO14967 610 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 BMP15O95972 392 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 RXRAP19793 462 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 COPB1P53618 953 aaKnown RBP8.75□□□□□ -1.01
CHD8-209ENST00000555935 SKOR1P84550 965 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 DDR1Q08345 913 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 DPYDQ12882 1025 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 LRRC24Q50LG9 513 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 KCNV1Q6PIU1 500 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 OR8K1Q8NGG5 319 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 STAG1Q8WVM7 1258 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 PAGE5Q96GU1 130 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 CABS1Q96KC9 395 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 LY9Q9HBG7 655 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 REXO2Q9Y3B8 237 aaKnown RBP8.75□□□□□ -1.01
CHD8-209ENST00000555935 ATRNO75882 1429 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 KRT86O43790 486 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 ATP1A1P05023 1023 aaKnown RBP8.75□□□□□ -1.01
CHD8-209ENST00000555935 GNGT1P63211 74 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 ITIH3Q06033 890 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 FAM69CQ0P6D2 419 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 TMEM67Q5HYA8 995 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 CAGE1Q8TC20 777 aa8.75□□□□□ -1.01
CHD8-209ENST00000555935 JAKMIP2Q96AA8 810 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms