RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TFCP2Q12800 502 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 IFIT5Q13325 482 aaKnown RBP8.19□□□□□ -1.1
SLIRP-204ENST00000555890 RABEP1Q15276 862 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 TNNI3KQ59H18 835 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 TAF7LQ5H9L4 462 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 KIAA1211Q6ZU35 1233 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 KRT26Q7Z3Y9 468 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 TRPM4Q8TD43 1214 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 SNX21Q969T3 373 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 FAM89AQ96GI7 184 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 DIAPH3Q9NSV4 1193 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 FPGT-TNNI3KV9GXZ4 949 aa8.19□□□□□ -1.1
SLIRP-204ENST00000555890 ANKRD18BA2A2Z9 1011 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 SOBPA7XYQ1 873 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 IRS4O14654 1257 aaPredicted RBP8.18□□□□□ -1.1
SLIRP-204ENST00000555890 PDE8AO60658 829 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 MAP4K4O95819 1239 aaPredicted RBP8.18□□□□□ -1.1
SLIRP-204ENST00000555890 ATP5JP18859 108 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 SP3Q02447 781 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 CXCL9Q07325 125 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 MTFR1Q15390 333 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 POTEEQ6S8J3 1075 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 UTP14AQ9BVJ6 771 aaKnown RBP8.18□□□□□ -1.1
SLIRP-204ENST00000555890 CEP126Q9P2H0 1117 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 AKAP2Q9Y2D5 859 aa8.18□□□□□ -1.1
SLIRP-204ENST00000555890 TK2O00142 265 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 GMPSP49915 693 aaPredicted RBP8.17□□□□□ -1.1
SLIRP-204ENST00000555890 CTSWP56202 376 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 NR1H3Q13133 447 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 AAK1Q2M2I8 961 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 CRY2Q49AN0 593 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 DESI1Q6ICB0 168 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 CLEC4GQ6UXB4 293 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 ATG9AQ7Z3C6 839 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 KCTD12Q96CX2 325 aaKnown RBP8.17□□□□□ -1.1
SLIRP-204ENST00000555890 NEUROD6Q96NK8 337 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 ANO2Q9NQ90 1003 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 SH3TC1Q8TE82 1336 aa8.17□□□□□ -1.1
SLIRP-204ENST00000555890 CFHP08603 1231 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 ALDH1B1P30837 517 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 HOXA10P31260 410 aaPredicted RBP8.16□□□□□ -1.1
SLIRP-204ENST00000555890 ANAPC15P60006 121 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 FKBP1BP68106 108 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 FAM205AQ6ZU69 1335 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 RETREG3Q86VR2 466 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 NBPF5PQ86XG9 351 aaPredicted RBP8.16□□□□□ -1.1
SLIRP-204ENST00000555890 TICAM2Q86XR7 235 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 LARGE2Q8N3Y3 721 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 TTLL11Q8NHH1 800 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 ZNF594Q96JF6 807 aaPredicted RBP8.16□□□□□ -1.1
SLIRP-204ENST00000555890 KIF2CQ99661 725 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 BOLA2Q9H3K6 86 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 RABGEF1Q9UJ41 708 aa8.16□□□□□ -1.1
SLIRP-204ENST00000555890 LAMB2P55268 1798 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 SGSM2O43147 1006 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 ZIC2O95409 532 aaPredicted RBP8.15□□□□□ -1.1
SLIRP-204ENST00000555890 EGFRP00533 1210 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 CAPN2P17655 700 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 ITGA6P23229 1130 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 PTPN5P54829 565 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 LRRC24Q50LG9 513 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 CCDC158Q5M9N0 1113 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 AKNAD1Q5T1N1 836 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 GORABQ5T7V8 394 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 SUSD4Q5VX71 490 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 CC2D2BQ6DHV5 1058 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 CWC27Q6UX04 472 aaKnown RBP8.15□□□□□ -1.1
SLIRP-204ENST00000555890 LDHAL6AQ6ZMR3 332 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 DBNDD2Q9BQY9 259 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 FSD1Q9BTV5 496 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 CNNM1Q9NRU3 951 aa8.15□□□□□ -1.1
SLIRP-204ENST00000555890 TLR7Q9NYK1 1049 aaKnown RBP8.15□□□□□ -1.1
SLIRP-204ENST00000555890 CXXC1Q9P0U4 656 aaPredicted RBP8.15□□□□□ -1.1
SLIRP-204ENST00000555890 DBNLQ9UJU6 430 aaKnown RBP8.15□□□□□ -1.1
SLIRP-204ENST00000555890 NIP7Q9Y221 180 aaKnown RBP eCLIP8.15□□□□□ -1.1
SLIRP-204ENST00000555890 SPEF2Q9C093 1822 aa8.15□□□□□ -1.11
SLIRP-204ENST00000555890 RFX7Q2KHR2 1363 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 UBN2Q6ZU65 1347 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 RAD50Q92878 1312 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 A0A1B0GUL7 405 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 K7ELQ4 463 aaPredicted RBP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 HSP90AA1P07900 732 aaKnown RBP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 MCM2P49736 904 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 LRRFIP1Q32MZ4 808 aaKnown RBP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 Q3C1V9 767 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 CCDC152Q4G0S7 254 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 TPTE2Q6XPS3 522 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 U2AF1L4Q8WU68 220 aaKnown RBP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 CCDC85AQ96PX6 553 aaPredicted RBP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 HAUS7Q99871 368 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 PUS3Q9BZE2 481 aaKnown RBP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 ZNRF3Q9ULT6 936 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 ZNF462Q96JM2 2506 aa8.14□□□□□ -1.11
SLIRP-204ENST00000555890 DDX60Q8IY21 1712 aaKnown RBP8.14□□□□□ -1.11
SLIRP-204ENST00000555890 ABCC12Q96J65 1359 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 USP24Q9UPU5 2620 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms