RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 BTBD18B2RXH4 712 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 CDK11BP21127 795 aaKnown RBP8.01□□□□□ -1.13
TDP1-213ENST00000555880 LCORLQ8N3X6 602 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 TRIML1Q8N9V2 468 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 MLKLQ8NB16 471 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 ESR2Q92731 530 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 SLC4A9Q96Q91 983 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 INCENPQ9NQS7 918 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 GNL3LQ9NVN8 582 aaKnown RBP8.01□□□□□ -1.13
TDP1-213ENST00000555880 PCDHA5Q9Y5H7 936 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 PHLPP2Q6ZVD8 1323 aa8.01□□□□□ -1.13
TDP1-213ENST00000555880 WNK3Q9BYP7 1800 aa8□□□□□ -1.13
TDP1-213ENST00000555880 GOLGA6L9A6NEM1 432 aa8□□□□□ -1.13
TDP1-213ENST00000555880 POLR2DO15514 142 aaKnown RBP8□□□□□ -1.13
TDP1-213ENST00000555880 ZSCAN20P17040 1043 aaPredicted RBP8□□□□□ -1.13
TDP1-213ENST00000555880 PTPREP23469 700 aa8□□□□□ -1.13
TDP1-213ENST00000555880 ELF2Q15723 593 aa8□□□□□ -1.13
TDP1-213ENST00000555880 POTEEQ6S8J3 1075 aa8□□□□□ -1.13
TDP1-213ENST00000555880 SYT10Q6XYQ8 523 aa8□□□□□ -1.13
TDP1-213ENST00000555880 ZNF654Q8IZM8 581 aa8□□□□□ -1.13
TDP1-213ENST00000555880 STK11IPQ8N1F8 1099 aa8□□□□□ -1.13
TDP1-213ENST00000555880 CRACR2BQ8N4Y2 399 aaPredicted RBP8□□□□□ -1.13
TDP1-213ENST00000555880 FANCBQ8NB91 859 aa8□□□□□ -1.13
TDP1-213ENST00000555880 NKX2-3Q8TAU0 364 aa8□□□□□ -1.13
TDP1-213ENST00000555880 NUP133Q8WUM0 1156 aa8□□□□□ -1.13
TDP1-213ENST00000555880 CDC5LQ99459 802 aaKnown RBP8□□□□□ -1.13
TDP1-213ENST00000555880 ZKSCAN3Q9BRR0 538 aa8□□□□□ -1.13
TDP1-213ENST00000555880 L2HGDHQ9H9P8 463 aa8□□□□□ -1.13
TDP1-213ENST00000555880 BRMS1Q9HCU9 246 aa8□□□□□ -1.13
TDP1-213ENST00000555880 CCDC87Q9NVE4 849 aa8□□□□□ -1.13
TDP1-213ENST00000555880 FANCLQ9NW38 375 aa8□□□□□ -1.13
TDP1-213ENST00000555880 FBXO2Q9UK22 296 aaPredicted RBP8□□□□□ -1.13
TDP1-213ENST00000555880 KCNJ14Q9UNX9 436 aa8□□□□□ -1.13
TDP1-213ENST00000555880 SPATA31A1Q5TZJ5 1347 aa8□□□□□ -1.13
TDP1-213ENST00000555880 MAGEB6P1A0A0J9YX57 407 aa8□□□□□ -1.13
TDP1-213ENST00000555880 ARHGAP6O43182 974 aa8□□□□□ -1.13
TDP1-213ENST00000555880 PRKAB2O43741 272 aa8□□□□□ -1.13
TDP1-213ENST00000555880 BMP15O95972 392 aa8□□□□□ -1.13
TDP1-213ENST00000555880 CYP7A1P22680 504 aa8□□□□□ -1.13
TDP1-213ENST00000555880 BCAMP50895 628 aa8□□□□□ -1.13
TDP1-213ENST00000555880 ETF1P62495 437 aaKnown RBP8□□□□□ -1.13
TDP1-213ENST00000555880 PPARAQ07869 468 aa8□□□□□ -1.13
TDP1-213ENST00000555880 NAA30Q147X3 362 aaPredicted RBP8□□□□□ -1.13
TDP1-213ENST00000555880 SUSD4Q5VX71 490 aa8□□□□□ -1.13
TDP1-213ENST00000555880 MIGA1Q8NAN2 632 aa8□□□□□ -1.13
TDP1-213ENST00000555880 SRRTQ9BXP5 876 aaKnown RBP8□□□□□ -1.13
TDP1-213ENST00000555880 RNF26Q9BY78 433 aaPredicted RBP8□□□□□ -1.13
TDP1-213ENST00000555880 HSD3B7Q9H2F3 369 aa8□□□□□ -1.13
TDP1-213ENST00000555880 RAI14Q9P0K7 980 aa8□□□□□ -1.13
TDP1-213ENST00000555880 NOL12Q9UGY1 213 aaKnown RBP eCLIP8□□□□□ -1.13
TDP1-213ENST00000555880 DDX41Q9UJV9 622 aaKnown RBP8□□□□□ -1.13
TDP1-213ENST00000555880 SRPRBQ9Y5M8 271 aaKnown RBP8□□□□□ -1.13
TDP1-213ENST00000555880 V9GYY5 206 aaPredicted RBP8□□□□□ -1.13
TDP1-213ENST00000555880 MYH2Q9UKX2 1941 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 COL22A1Q8NFW1 1626 aaPredicted RBP7.99□□□□□ -1.13
TDP1-213ENST00000555880 TRIM75PA6NK02 468 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 MINDY4BA8MYZ0 360 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 GUCY1A2P33402 732 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 TOB1P50616 345 aaPredicted RBP7.99□□□□□ -1.13
TDP1-213ENST00000555880 EIF5P55010 431 aaKnown RBP7.99□□□□□ -1.13
TDP1-213ENST00000555880 MDM2Q00987 491 aaPredicted RBP7.99□□□□□ -1.13
TDP1-213ENST00000555880 GABPB1Q06547 395 aaPredicted RBP7.99□□□□□ -1.13
TDP1-213ENST00000555880 NT5DC1Q5TFE4 455 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 SPECC1LQ69YQ0 1117 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 CATIPQ7Z7H3 387 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 KRT222Q8N1A0 295 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 CCDC82Q8N4S0 544 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 PDILTQ8N807 584 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 MNS1Q8NEH6 495 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 PTCD2Q8WV60 388 aaKnown RBP7.99□□□□□ -1.13
TDP1-213ENST00000555880 RNF166Q96A37 237 aaPredicted RBP7.99□□□□□ -1.13
TDP1-213ENST00000555880 NGLY1Q96IV0 654 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 SEC31BQ9NQW1 1179 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 DNAI1Q9UI46 699 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 MAN1B1Q9UKM7 699 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 ZNF652Q9Y2D9 606 aa7.99□□□□□ -1.13
TDP1-213ENST00000555880 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.99□□□□□ -1.13
TDP1-213ENST00000555880 MORC2Q9Y6X9 1032 aaPredicted RBP7.99□□□□□ -1.13
TDP1-213ENST00000555880 UBE2Q2LH0YL09 131 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 TPM1P09493 284 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 CALM1P0DP23 149 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 CALM2P0DP24 149 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 CALM3P0DP25 149 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 ATP2B1P20020 1258 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 ERCC5P28715 1186 aaPredicted RBP7.98□□□□□ -1.13
TDP1-213ENST00000555880 KRT2P35908 639 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 CRKLP46109 303 aaKnown RBP7.98□□□□□ -1.13
TDP1-213ENST00000555880 PLCD1P51178 756 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 LSM11P83369 360 aaKnown RBP eCLIP7.98□□□□□ -1.13
TDP1-213ENST00000555880 CHRNDQ07001 517 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 NR5A1Q13285 461 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 MORC3Q14149 939 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 KMT5BQ4FZB7 885 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 CT47A1Q5JQC4 288 aaPredicted RBP7.98□□□□□ -1.13
TDP1-213ENST00000555880 SPECC1Q5M775 1068 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 IQCA1Q86XH1 822 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 ENOX1Q8TC92 643 aaKnown RBP7.98□□□□□ -1.13
TDP1-213ENST00000555880 DPF2Q92785 391 aa7.98□□□□□ -1.13
TDP1-213ENST00000555880 BAG1Q99933 345 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms