RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 SEPT14Q6ZU15 432 aa19.42■□□□□ 0.7
SYNE3-204ENST00000555759 GBP7Q8N8V2 638 aaPredicted RBP19.42■□□□□ 0.7
SYNE3-204ENST00000555759 LGSNQ5TDP6 509 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 C2CD5Q86YS7 1000 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 CCDC105Q8IYK2 499 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 NUF2Q9BZD4 464 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 HGSO14964 777 aaPredicted RBP19.41■□□□□ 0.7
SYNE3-204ENST00000555759 CD2BP2O95400 341 aaKnown RBP19.41■□□□□ 0.7
SYNE3-204ENST00000555759 TNNI2P48788 182 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 NBPF6Q5VWK0 638 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 MAGEB6Q8N7X4 407 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 NBPF4Q96M43 638 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 RTEL1Q9NZ71 1219 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 TXNDC9O14530 226 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 MORC3Q14149 939 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 RASIP1Q5U651 963 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 PIK3AP1Q6ZUJ8 805 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 SLC35F6Q8N357 371 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 ZKSCAN3Q9BRR0 538 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 AMFRQ9UKV5 643 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 KRT15P19012 456 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 UAP1Q16222 522 aaPredicted RBP19.41■□□□□ 0.7
SYNE3-204ENST00000555759 Q9H521 79 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 GNA14O95837 355 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 PPP2R5AQ15172 486 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 RRAGAQ7L523 313 aa19.41■□□□□ 0.7
SYNE3-204ENST00000555759 N4BP2L2Q92802 583 aaPredicted RBP19.41■□□□□ 0.7
SYNE3-204ENST00000555759 HSPA1LP34931 641 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 ALS2CLQ60I27 953 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 GAS8O95995 478 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 RFC1P35251 1148 aaPredicted RBP19.4■□□□□ 0.7
SYNE3-204ENST00000555759 E2F4Q16254 413 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 HSP90AA5PQ58FG0 334 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 TCHPQ9BT92 498 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 SARM1Q6SZW1 724 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 AMOTL2Q9Y2J4 779 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 KIF1CO43896 1103 aaKnown RBP19.4■□□□□ 0.7
SYNE3-204ENST00000555759 ZPR1O75312 459 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 ERCC3P19447 782 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 CASP8Q14790 479 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 CTTNBP2NLQ9P2B4 639 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 ADAM21Q9UKJ8 722 aa19.4■□□□□ 0.7
SYNE3-204ENST00000555759 CCHCR1Q8TD31 782 aa19.39■□□□□ 0.7
SYNE3-204ENST00000555759 CCDC97Q96F63 343 aaPredicted RBP19.39■□□□□ 0.7
SYNE3-204ENST00000555759 E7EWF7 191 aa19.39■□□□□ 0.69
SYNE3-204ENST00000555759 CHUKO15111 745 aa19.39■□□□□ 0.69
SYNE3-204ENST00000555759 NDUFA8P51970 172 aa19.39■□□□□ 0.69
SYNE3-204ENST00000555759 LETM2Q2VYF4 491 aa19.39■□□□□ 0.69
SYNE3-204ENST00000555759 KRIT1O00522 736 aa19.39■□□□□ 0.69
SYNE3-204ENST00000555759 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.39■□□□□ 0.69
SYNE3-204ENST00000555759 STK24Q9Y6E0 443 aa19.39■□□□□ 0.69
SYNE3-204ENST00000555759 RAD51AP2Q09MP3 1159 aa19.39■□□□□ 0.69
SYNE3-204ENST00000555759 STAP2Q9UGK3 403 aa19.39■□□□□ 0.69
SYNE3-204ENST00000555759 WDR78Q5VTH9 848 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 ANKRD42Q8N9B4 389 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 RPSAP08865 295 aaKnown RBP19.38■□□□□ 0.69
SYNE3-204ENST00000555759 RASEFQ8IZ41 740 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 RNF14Q9UBS8 474 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 GMNNO75496 209 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 SSH3Q8TE77 659 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 SPDYE3A6NKU9 549 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 EYA2O00167 538 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 LIN9Q5TKA1 542 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 CLEC17AQ6ZS10 378 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 TPX2Q9ULW0 747 aaKnown RBP19.38■□□□□ 0.69
SYNE3-204ENST00000555759 ATP5JP18859 108 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 DBNDD2Q9BQY9 259 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 THEGQ9P2T0 379 aa19.38■□□□□ 0.69
SYNE3-204ENST00000555759 ABCC1P33527 1531 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 IL13P35225 146 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 CNOT10Q9H9A5 744 aaKnown RBP19.37■□□□□ 0.69
SYNE3-204ENST00000555759 KCNK3O14649 394 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 C11orf57Q6ZUT1 292 aaPredicted RBP19.37■□□□□ 0.69
SYNE3-204ENST00000555759 DDX27Q96GQ7 796 aaKnown RBP19.37■□□□□ 0.69
SYNE3-204ENST00000555759 CHAMP1Q96JM3 812 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 V9GY48 417 aaPredicted RBP19.37■□□□□ 0.69
SYNE3-204ENST00000555759 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 MBD4O95243 580 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 HAUS3Q68CZ6 603 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 NOSTRINQ8IVI9 506 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 FAM207AQ9NSI2 230 aaPredicted RBP19.37■□□□□ 0.69
SYNE3-204ENST00000555759 ZNF521Q96K83 1311 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 FRMD3A2A2Y4 597 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 EIF3CLB5ME19 914 aaKnown RBP19.37■□□□□ 0.69
SYNE3-204ENST00000555759 E2F5Q15329 346 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 MGARPQ8TDB4 240 aa19.37■□□□□ 0.69
SYNE3-204ENST00000555759 EIF3CQ99613 913 aaKnown RBP19.37■□□□□ 0.69
SYNE3-204ENST00000555759 GPAA1O43292 621 aa19.36■□□□□ 0.69
SYNE3-204ENST00000555759 OPHN1O60890 802 aa19.36■□□□□ 0.69
SYNE3-204ENST00000555759 SMC1BQ8NDV3 1235 aa19.36■□□□□ 0.69
SYNE3-204ENST00000555759 PTH1RQ03431 593 aa19.36■□□□□ 0.69
SYNE3-204ENST00000555759 RAPGEF6Q8TEU7 1601 aa19.36■□□□□ 0.69
SYNE3-204ENST00000555759 GUCY2DQ02846 1103 aa19.36■□□□□ 0.69
SYNE3-204ENST00000555759 RNASELQ05823 741 aaKnown RBP19.36■□□□□ 0.69
SYNE3-204ENST00000555759 RUNDC3BQ96NL0 473 aa19.36■□□□□ 0.69
SYNE3-204ENST00000555759 MAK16Q9BXY0 300 aaKnown RBP19.36■□□□□ 0.69
SYNE3-204ENST00000555759 A2MP01023 1474 aa19.36■□□□□ 0.69
SYNE3-204ENST00000555759 PFDN1O60925 122 aa19.35■□□□□ 0.69
SYNE3-204ENST00000555759 GUCY2CP25092 1073 aa19.35■□□□□ 0.69
SYNE3-204ENST00000555759 KCTD16Q68DU8 428 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms