RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 CTCFLQ8NI51 663 aaPredicted RBP21.29■■□□□ 1
GABRB3-209ENST00000555632 PIBF1Q8WXW3 757 aa21.29■■□□□ 1
GABRB3-209ENST00000555632 CNTNAP5Q8WYK1 1306 aa21.29■■□□□ 1
GABRB3-209ENST00000555632 PRPF3O43395 683 aaKnown RBP21.29■■□□□ 1
GABRB3-209ENST00000555632 TOB1P50616 345 aaPredicted RBP21.29■■□□□ 1
GABRB3-209ENST00000555632 SLC39A14Q15043 492 aa21.29■■□□□ 1
GABRB3-209ENST00000555632 AXDND1Q5T1B0 1012 aaPredicted RBP21.29■■□□□ 1
GABRB3-209ENST00000555632 RASGRP2Q7LDG7 609 aa21.29■■□□□ 1
GABRB3-209ENST00000555632 DGKHQ86XP1 1220 aa21.29■■□□□ 1
GABRB3-209ENST00000555632 PNMA1Q8ND90 353 aa21.29■■□□□ 1
GABRB3-209ENST00000555632 ANP32BQ92688 251 aaKnown RBP21.29■■□□□ 1
GABRB3-209ENST00000555632 KAT14Q9H8E8 782 aa21.29■■□□□ 1
GABRB3-209ENST00000555632 SUGT1Q9Y2Z0 365 aa21.29■■□□□ 1
GABRB3-209ENST00000555632 NDUFA8P51970 172 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 AKAP17AQ02040 695 aaKnown RBP21.28■■□□□ 1
GABRB3-209ENST00000555632 PODNQ7Z5L7 613 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 STAG2Q8N3U4 1231 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 STX8Q9UNK0 236 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 MTMR7Q9Y216 660 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 QSER1Q2KHR3 1735 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 FOCADQ5VW36 1801 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 CCDC192P0DO97 292 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 FAM160A1Q05DH4 1040 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 TYRO3Q06418 890 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 AOC3Q16853 763 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 CCDC73Q6ZRK6 1079 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 MRVI1Q9Y6F6 885 aa21.28■■□□□ 1
GABRB3-209ENST00000555632 ECE2O60344 883 aa21.27■■□□□ 1
GABRB3-209ENST00000555632 APOBEC3HQ6NTF7 200 aaKnown RBP21.27■■□□□ 1
GABRB3-209ENST00000555632 KIAA0825Q8IV33 1275 aa21.27■■□□□ 1
GABRB3-209ENST00000555632 FMR1NBQ8N0W7 255 aaPredicted RBP21.27■■□□□ 1
GABRB3-209ENST00000555632 MRPS27Q92552 414 aaKnown RBP21.27■■□□□ 1
GABRB3-209ENST00000555632 ERCC4Q92889 916 aaPredicted RBP21.27■■□□□ 1
GABRB3-209ENST00000555632 CNKSR1Q969H4 720 aa21.27■■□□□ 1
GABRB3-209ENST00000555632 PDLIM2Q96JY6 352 aa21.27■■□□□ 1
GABRB3-209ENST00000555632 FAM205CA6NFA0 338 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 SAFBQ15424 915 aaKnown RBP eCLIP21.26■□□□□ 0.99
GABRB3-209ENST00000555632 EARS2Q5JPH6 523 aaKnown RBP21.26■□□□□ 0.99
GABRB3-209ENST00000555632 ANKS1AQ92625 1134 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 FOXP1Q9H334 677 aaPredicted RBP21.26■□□□□ 0.99
GABRB3-209ENST00000555632 USP40Q9NVE5 1235 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 A0A1W2PQ27 194 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 A0A1W2PQ64 194 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 A0A1W2PQD8 194 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 C21orf2O43822 256 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 SLURP2P0DP57 97 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 CDC42EP5Q6NZY7 148 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 TMEM47Q9BQJ4 181 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 PHF20Q9BVI0 1012 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 TCP11L1Q9NUJ3 509 aa21.26■□□□□ 0.99
GABRB3-209ENST00000555632 NFIAQ12857 509 aa21.25■□□□□ 0.99
GABRB3-209ENST00000555632 SLC35G1Q2M3R5 365 aa21.25■□□□□ 0.99
GABRB3-209ENST00000555632 CLIC6Q96NY7 704 aa21.25■□□□□ 0.99
GABRB3-209ENST00000555632 A0A087WWV3 80 aa21.25■□□□□ 0.99
GABRB3-209ENST00000555632 ADAMTS3O15072 1205 aa21.25■□□□□ 0.99
GABRB3-209ENST00000555632 NPY5RQ15761 445 aa21.25■□□□□ 0.99
GABRB3-209ENST00000555632 NOM1Q5C9Z4 860 aaKnown RBP21.25■□□□□ 0.99
GABRB3-209ENST00000555632 DACT2Q5SW24 774 aa21.25■□□□□ 0.99
GABRB3-209ENST00000555632 MAD2L2Q9UI95 211 aa21.25■□□□□ 0.99
GABRB3-209ENST00000555632 CRKP46108 304 aa21.24■□□□□ 0.99
GABRB3-209ENST00000555632 BAG6P46379 1132 aa21.24■□□□□ 0.99
GABRB3-209ENST00000555632 TEKT1Q969V4 418 aa21.24■□□□□ 0.99
GABRB3-209ENST00000555632 CABP5Q9NP86 173 aa21.24■□□□□ 0.99
GABRB3-209ENST00000555632 USP25Q9UHP3 1055 aa21.24■□□□□ 0.99
GABRB3-209ENST00000555632 PCDHB6Q9Y5E3 794 aa21.24■□□□□ 0.99
GABRB3-209ENST00000555632 KINO60870 393 aaKnown RBP21.23■□□□□ 0.99
GABRB3-209ENST00000555632 CACNB3P54284 484 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 SF3B2Q13435 895 aaKnown RBP21.23■□□□□ 0.99
GABRB3-209ENST00000555632 HHIPL2Q6UWX4 724 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 CEP95Q96GE4 821 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 ATP2B1P20020 1258 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 GABPAQ06546 454 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 ANO6Q4KMQ2 910 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 STRIP1Q5VSL9 837 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 SHC4Q6S5L8 630 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 ZFPM1Q8IX07 1006 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 NEDD1Q8NHV4 660 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 ZNF287Q9HBT7 754 aa21.23■□□□□ 0.99
GABRB3-209ENST00000555632 ZNF646O15015 1829 aaPredicted RBP21.22■□□□□ 0.99
GABRB3-209ENST00000555632 GOLGA8HP0CJ92 632 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 CPVLQ9H3G5 476 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 AP5Z1O43299 807 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 CYTH3O43739 400 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 PPP6R2O75170 966 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 PFKFB1P16118 471 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 KIF5BP33176 963 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 GRIN1Q05586 938 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 GRM4Q14833 912 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 KLHL34Q8N239 644 aa21.22■□□□□ 0.99
GABRB3-209ENST00000555632 TRIM44Q96DX7 344 aaPredicted RBP21.22■□□□□ 0.99
GABRB3-209ENST00000555632 WNT7AO00755 349 aa21.21■□□□□ 0.99
GABRB3-209ENST00000555632 SCG2P13521 617 aa21.21■□□□□ 0.99
GABRB3-209ENST00000555632 XBP1P17861 261 aa21.21■□□□□ 0.99
GABRB3-209ENST00000555632 CMA1P23946 247 aa21.21■□□□□ 0.99
GABRB3-209ENST00000555632 NT5C2P49902 561 aa21.21■□□□□ 0.99
GABRB3-209ENST00000555632 CLEC10AQ8IUN9 316 aa21.21■□□□□ 0.99
GABRB3-209ENST00000555632 FBXO41Q8TF61 875 aa21.21■□□□□ 0.99
GABRB3-209ENST00000555632 RRAGDQ9NQL2 400 aaPredicted RBP21.21■□□□□ 0.99
GABRB3-209ENST00000555632 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.21■□□□□ 0.99
GABRB3-209ENST00000555632 YDJCA8MPS7 323 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms