RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 KCNH3Q9ULD8 1083 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 R3HCC1Q9Y3T6 440 aaKnown RBP27.94■■■□□ 2.06
TMEM260-207ENST00000555497 BBOX1O75936 387 aa27.93■■■□□ 2.06
TMEM260-207ENST00000555497 TFAP4Q01664 338 aa27.93■■■□□ 2.06
TMEM260-207ENST00000555497 NAT10Q9H0A0 1025 aaKnown RBP27.93■■■□□ 2.06
TMEM260-207ENST00000555497 IGSF3O75054 1194 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 NPY5RQ15761 445 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 TXNRD1Q16881 649 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 ISM2Q6H9L7 571 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 CTCFLQ8NI51 663 aaPredicted RBP27.92■■■□□ 2.06
TMEM260-207ENST00000555497 KIAA1524Q8TCG1 905 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 CDK5RAP2Q96SN8 1893 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 BAG3O95817 575 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 CDC25BP30305 580 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 PNOCQ13519 176 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 NOM1Q5C9Z4 860 aaKnown RBP27.92■■■□□ 2.06
TMEM260-207ENST00000555497 TBC1D16Q8TBP0 767 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 CLIP2Q9UDT6 1046 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 TUBE1Q9UJT0 475 aa27.92■■■□□ 2.06
TMEM260-207ENST00000555497 VEGFAP15692 232 aaPredicted RBP27.91■■■□□ 2.06
TMEM260-207ENST00000555497 XBP1P17861 261 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 CCDC144BQ3MJ40 725 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 METTL16Q86W50 562 aaKnown RBP27.91■■■□□ 2.06
TMEM260-207ENST00000555497 PODXL2Q9NZ53 605 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 NAV1Q8NEY1 1877 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 KLRG2A4D1S0 409 aaPredicted RBP27.91■■■□□ 2.06
TMEM260-207ENST00000555497 KRT2P35908 639 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 PLCD1P51178 756 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 MAPKAPK5Q8IW41 473 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 SLC44A5Q8NCS7 719 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 BPIFA3Q9BQP9 254 aa27.91■■■□□ 2.06
TMEM260-207ENST00000555497 ROBO3Q96MS0 1386 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 LDHCP07864 332 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 ZRSR1Q15695 479 aaKnown RBP27.9■■■□□ 2.06
TMEM260-207ENST00000555497 KRBA2Q6ZNG9 492 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 FOXP4Q8IVH2 680 aaPredicted RBP27.9■■■□□ 2.06
TMEM260-207ENST00000555497 CRAMP1Q96RY5 1269 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 SPTLC3Q9NUV7 552 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 SAP30BPQ9UHR5 308 aaKnown RBP27.9■■■□□ 2.06
TMEM260-207ENST00000555497 WNT7AO00755 349 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 LRMPQ12912 555 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 TNFRSF25Q93038 417 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 MRFAP1L1Q96HT8 127 aa27.9■■■□□ 2.06
TMEM260-207ENST00000555497 BTDP43251 543 aa27.89■■■□□ 2.06
TMEM260-207ENST00000555497 USP17L3A6NCW0 530 aa27.88■■■□□ 2.05
TMEM260-207ENST00000555497 USP17L4A6NCW7 530 aa27.88■■■□□ 2.05
TMEM260-207ENST00000555497 FOXN1O15353 648 aa27.88■■■□□ 2.05
TMEM260-207ENST00000555497 USP17L1Q7RTZ2 530 aa27.88■■■□□ 2.05
TMEM260-207ENST00000555497 SRPRBQ9Y5M8 271 aaKnown RBP27.88■■■□□ 2.05
TMEM260-207ENST00000555497 NOL10Q9BSC4 688 aaKnown RBP27.88■■■□□ 2.05
TMEM260-207ENST00000555497 LTBP1Q14766 1721 aa27.88■■■□□ 2.05
TMEM260-207ENST00000555497 ANKRD31Q8N7Z5 1873 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 GPR75-ASB3A0A0A6YYF3 556 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 ADAMTS3O15072 1205 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 NCAPHQ15003 741 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 MKNK2Q9HBH9 465 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 MDM2Q00987 491 aaPredicted RBP27.87■■■□□ 2.05
TMEM260-207ENST00000555497 USP49Q70CQ1 688 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 DGKHQ86XP1 1220 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 CNNM3Q8NE01 707 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 ANKS1AQ92625 1134 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 KAT14Q9H8E8 782 aa27.87■■■□□ 2.05
TMEM260-207ENST00000555497 C6orf229H3BNL8 230 aa27.86■■■□□ 2.05
TMEM260-207ENST00000555497 ZNF827Q17R98 1081 aa27.86■■■□□ 2.05
TMEM260-207ENST00000555497 MFSD14BQ5SR56 506 aa27.86■■■□□ 2.05
TMEM260-207ENST00000555497 TRIM75PA6NK02 468 aa27.86■■■□□ 2.05
TMEM260-207ENST00000555497 STAG2Q8N3U4 1231 aa27.86■■■□□ 2.05
TMEM260-207ENST00000555497 ZNF579Q8NAF0 562 aaKnown RBP27.86■■■□□ 2.05
TMEM260-207ENST00000555497 CSRNP2Q9H175 543 aa27.86■■■□□ 2.05
TMEM260-207ENST00000555497 LRRC37AA6NMS7 1700 aa27.85■■■□□ 2.05
TMEM260-207ENST00000555497 SCG2P13521 617 aa27.85■■■□□ 2.05
TMEM260-207ENST00000555497 PNMA1Q8ND90 353 aa27.85■■■□□ 2.05
TMEM260-207ENST00000555497 CACTINQ8WUQ7 758 aaKnown RBP27.85■■■□□ 2.05
TMEM260-207ENST00000555497 CEP131Q9UPN4 1083 aa27.85■■■□□ 2.05
TMEM260-207ENST00000555497 PFKFB3Q16875 520 aaPredicted RBP27.84■■■□□ 2.05
TMEM260-207ENST00000555497 PCDHA5Q9Y5H7 936 aa27.84■■■□□ 2.05
TMEM260-207ENST00000555497 POLR2DO15514 142 aaKnown RBP27.84■■■□□ 2.05
TMEM260-207ENST00000555497 RASA1P20936 1047 aa27.84■■■□□ 2.05
TMEM260-207ENST00000555497 RHBDL3P58872 404 aa27.84■■■□□ 2.05
TMEM260-207ENST00000555497 FAM13BQ9NYF5 915 aa27.84■■■□□ 2.05
TMEM260-207ENST00000555497 TEX11Q8IYF3 940 aa27.83■■■□□ 2.05
TMEM260-207ENST00000555497 SERTAD1Q9UHV2 236 aa27.83■■■□□ 2.05
TMEM260-207ENST00000555497 PPEF1O14829 653 aaPredicted RBP27.83■■■□□ 2.05
TMEM260-207ENST00000555497 ARID5BQ14865 1188 aa27.83■■■□□ 2.05
TMEM260-207ENST00000555497 SLC35G1Q2M3R5 365 aa27.83■■■□□ 2.05
TMEM260-207ENST00000555497 OLFM4Q6UX06 510 aa27.83■■■□□ 2.05
TMEM260-207ENST00000555497 SP8Q8IXZ3 490 aa27.83■■■□□ 2.05
TMEM260-207ENST00000555497 AMOTL1Q8IY63 956 aa27.83■■■□□ 2.05
TMEM260-207ENST00000555497 TSPY3P0CV98 308 aa27.82■■■□□ 2.04
TMEM260-207ENST00000555497 TSPY8P0CW00 308 aa27.82■■■□□ 2.04
TMEM260-207ENST00000555497 KIF5BP33176 963 aa27.82■■■□□ 2.04
TMEM260-207ENST00000555497 ZNF444Q8N0Y2 327 aaPredicted RBP27.82■■■□□ 2.04
TMEM260-207ENST00000555497 HSD3B7Q9H2F3 369 aa27.82■■■□□ 2.04
TMEM260-207ENST00000555497 TCP11L1Q9NUJ3 509 aa27.82■■■□□ 2.04
TMEM260-207ENST00000555497 DDX60LQ5H9U9 1706 aaKnown RBP27.82■■■□□ 2.04
TMEM260-207ENST00000555497 BMP6P22004 513 aa27.82■■■□□ 2.04
TMEM260-207ENST00000555497 TERF1P54274 439 aa27.82■■■□□ 2.04
TMEM260-207ENST00000555497 COL23A1Q86Y22 540 aaPredicted RBP27.82■■■□□ 2.04
TMEM260-207ENST00000555497 ELOA2Q8IYF1 753 aaPredicted RBP27.82■■■□□ 2.04
TMEM260-207ENST00000555497 FAM163AQ96GL9 167 aaPredicted RBP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms