RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 FOXP4Q8IVH2 680 aaPredicted RBP11.9□□□□□ -0.5
NEK9-205ENST00000555405 GTF3C6Q969F1 213 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 DNAJC18Q9H819 358 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 ENTPD3O75355 529 aa11.9□□□□□ -0.51
NEK9-205ENST00000555405 POTEIP0CG38 1075 aa11.9□□□□□ -0.51
NEK9-205ENST00000555405 POTEJP0CG39 1038 aa11.9□□□□□ -0.51
NEK9-205ENST00000555405 EPHX2P34913 555 aa11.9□□□□□ -0.51
NEK9-205ENST00000555405 FEZ1Q99689 392 aa11.9□□□□□ -0.51
NEK9-205ENST00000555405 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
NEK9-205ENST00000555405 MAP1SQ66K74 1059 aaPredicted RBP11.89□□□□□ -0.51
NEK9-205ENST00000555405 TMEM47Q9BQJ4 181 aa11.89□□□□□ -0.51
NEK9-205ENST00000555405 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
NEK9-205ENST00000555405 ZMYM6O95789 1325 aa11.89□□□□□ -0.51
NEK9-205ENST00000555405 ZNF280AP59817 542 aaPredicted RBP11.89□□□□□ -0.51
NEK9-205ENST00000555405 GNL2Q13823 731 aaKnown RBP11.89□□□□□ -0.51
NEK9-205ENST00000555405 FAM173BQ6P4H8 233 aa11.89□□□□□ -0.51
NEK9-205ENST00000555405 TMTC2Q8N394 836 aa11.89□□□□□ -0.51
NEK9-205ENST00000555405 PFKFB2O60825 505 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 FANCBQ8NB91 859 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 ADARB2Q9NS39 739 aaKnown RBP11.88□□□□□ -0.51
NEK9-205ENST00000555405 GLTPD2A6NH11 291 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 PLEKHA8P1O95397 391 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 ATP2B1P20020 1258 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 INPP5BP32019 993 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 CEBPZQ03701 1054 aaKnown RBP11.88□□□□□ -0.51
NEK9-205ENST00000555405 ICA1Q05084 483 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 RRP1BQ14684 758 aaKnown RBP11.88□□□□□ -0.51
NEK9-205ENST00000555405 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 ZKSCAN4Q969J2 545 aaPredicted RBP11.88□□□□□ -0.51
NEK9-205ENST00000555405 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
NEK9-205ENST00000555405 NUP88Q99567 741 aaPredicted RBP11.88□□□□□ -0.51
NEK9-205ENST00000555405 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
NEK9-205ENST00000555405 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
NEK9-205ENST00000555405 SLC16A2P36021 539 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 JAG1P78504 1218 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 CUL4AQ13619 759 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 MOB2Q70IA6 237 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 NEDD1Q8NHV4 660 aa11.88□□□□□ -0.51
NEK9-205ENST00000555405 EEF2P13639 858 aaKnown RBP11.87□□□□□ -0.51
NEK9-205ENST00000555405 SYT1P21579 422 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 KCTD1Q719H9 257 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 WRNIP1Q96S55 665 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 SWAP70Q9UH65 585 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 DOCK2Q92608 1830 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 IGSF3O75054 1194 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 LIFRP42702 1097 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 SEC23AQ15436 765 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
NEK9-205ENST00000555405 KIF13BQ9NQT8 1826 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 USP17L5A8MUK1 530 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 ECE1P42892 770 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 SNAP25P60880 206 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 GABPAQ06546 454 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
NEK9-205ENST00000555405 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 GDPD2Q9HCC8 539 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 NMRK2Q9NPI5 230 aa11.87□□□□□ -0.51
NEK9-205ENST00000555405 CTDNEP1O95476 244 aa11.86□□□□□ -0.51
NEK9-205ENST00000555405 TRIM22Q8IYM9 498 aa11.86□□□□□ -0.51
NEK9-205ENST00000555405 CWC22Q9HCG8 908 aaKnown RBP11.86□□□□□ -0.51
NEK9-205ENST00000555405 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
NEK9-205ENST00000555405 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
NEK9-205ENST00000555405 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
NEK9-205ENST00000555405 STX6O43752 255 aa11.86□□□□□ -0.51
NEK9-205ENST00000555405 PCP11498 1178 aaKnown RBP11.86□□□□□ -0.51
NEK9-205ENST00000555405 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
NEK9-205ENST00000555405 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
NEK9-205ENST00000555405 DGKZQ13574 1117 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 TTLL1O95922 423 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 GUCY1A2P33402 732 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 GRM1Q13255 1194 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 TTBK2Q6IQ55 1244 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
NEK9-205ENST00000555405 C8orf76Q96K31 380 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 CCDC17Q96LX7 622 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
NEK9-205ENST00000555405 KCNJ14Q9UNX9 436 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 DLEC1Q9Y238 1755 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 KIAA1551Q9HCM1 1747 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 CCDC196A0A1B0GTZ2 297 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 TRIM75PA6NK02 468 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 TRAF5O00463 557 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 ZBTB22O15209 634 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 TOP1P11387 765 aaKnown RBP11.85□□□□□ -0.51
NEK9-205ENST00000555405 SLC1A4P43007 532 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 TRIM29Q14134 588 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 NBPF11Q86T75 865 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 FAM83AQ86UY5 434 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 APOBEC3FQ8IUX4 373 aaKnown RBP11.85□□□□□ -0.51
NEK9-205ENST00000555405 MTMR14Q8NCE2 650 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 IL17RAQ96F46 866 aa11.85□□□□□ -0.51
NEK9-205ENST00000555405 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
NEK9-205ENST00000555405 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
NEK9-205ENST00000555405 KLRF2D3W0D1 207 aa11.84□□□□□ -0.51
NEK9-205ENST00000555405 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
NEK9-205ENST00000555405 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
NEK9-205ENST00000555405 NUCB2P80303 420 aa11.84□□□□□ -0.51
NEK9-205ENST00000555405 SGMS1Q86VZ5 419 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms