RNA–Protein interactions for RNA: ENST00000555371.1

NFKBIA-204, Transcript of NFKB inhibitor alpha, humanhuman

TSL 3

Gene NFKBIA, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-204ENST00000555371 SSH1Q8WYL5 1049 aa13.23□□□□□ -0.29
NFKBIA-204ENST00000555371 KCNH6Q9H252 994 aa13.23□□□□□ -0.29
NFKBIA-204ENST00000555371 RBPJLQ9UBG7 517 aa13.23□□□□□ -0.29
NFKBIA-204ENST00000555371 TRANK1O15050 2925 aa13.23□□□□□ -0.29
NFKBIA-204ENST00000555371 ZBED9Q6R2W3 1325 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 RABGGTBP53611 331 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 FOXO4P98177 505 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 PPIGQ13427 754 aaKnown RBP eCLIP13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 PICALMQ13492 652 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 MTMR2Q13614 643 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 FAM47AQ5JRC9 791 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 LMBR1LQ6UX01 489 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 C16orf59Q7L2K0 433 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 LINS1Q8NG48 757 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 HLA-CQ95604 372 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 PUS3Q9BZE2 481 aaKnown RBP13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 SUGT1Q9Y2Z0 365 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 SMCHD1A6NHR9 2005 aa13.22□□□□□ -0.29
NFKBIA-204ENST00000555371 C5orf42Q9H799 3197 aa13.21□□□□□ -0.29
NFKBIA-204ENST00000555371 MYOGP15173 224 aa13.21□□□□□ -0.29
NFKBIA-204ENST00000555371 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
NFKBIA-204ENST00000555371 RASIP1Q5U651 963 aa13.21□□□□□ -0.29
NFKBIA-204ENST00000555371 CCDC174Q6PII3 467 aa13.21□□□□□ -0.29
NFKBIA-204ENST00000555371 ZNF365Q70YC5 407 aa13.21□□□□□ -0.29
NFKBIA-204ENST00000555371 MTCH2Q9Y6C9 303 aa13.21□□□□□ -0.29
NFKBIA-204ENST00000555371 COL4A4P53420 1690 aaPredicted RBP13.21□□□□□ -0.3
NFKBIA-204ENST00000555371 CSF2RAP15509 400 aa13.2□□□□□ -0.3
NFKBIA-204ENST00000555371 FAAP100Q0VG06 881 aa13.2□□□□□ -0.3
NFKBIA-204ENST00000555371 GJD3Q8N144 294 aa13.2□□□□□ -0.3
NFKBIA-204ENST00000555371 CERS4Q9HA82 394 aa13.2□□□□□ -0.3
NFKBIA-204ENST00000555371 TMOD4Q9NZQ9 345 aa13.2□□□□□ -0.3
NFKBIA-204ENST00000555371 RFX7Q2KHR2 1363 aa13.2□□□□□ -0.3
NFKBIA-204ENST00000555371 PTPRCP08575 1304 aa13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 GFRA3O60609 400 aa13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 ENTPD3O75355 529 aa13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 GLRX3O76003 335 aaKnown RBP13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 TIMP1P01033 207 aa13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 PRDX5P30044 214 aa13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 BEND3Q5T5X7 828 aa13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 PSRC1Q6PGN9 363 aaPredicted RBP13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 DDX4Q9NQI0 724 aaKnown RBP13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
NFKBIA-204ENST00000555371 A0A1W2PQ45 241 aaPredicted RBP13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 A0A1W2PQY0 241 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 SLC15A5A6NIM6 579 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 SEPT4O43236 478 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 KRT37O76014 449 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 ALADP13716 330 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 RARSP54136 660 aaKnown RBP13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 MAP3K10Q02779 954 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 MFSD5Q6N075 450 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 PPP1R12CQ9BZL4 782 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 SRCIN1Q9C0H9 1055 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 AS3MTQ9HBK9 375 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 IVNS1ABPQ9Y6Y0 642 aa13.18□□□□□ -0.3
NFKBIA-204ENST00000555371 PTPREP23469 700 aa13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 PRAMEF19Q5SWL8 479 aa13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 HFE2Q6ZVN8 426 aa13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 PRSS33Q8NF86 280 aa13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 FRAT1Q92837 279 aaPredicted RBP13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 IDI2Q9BXS1 227 aa13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
NFKBIA-204ENST00000555371 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 EPOPA6NHQ4 379 aa13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 ALDH1L1O75891 902 aa13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 PGK1P00558 417 aa13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 RRP1BQ14684 758 aaKnown RBP13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 TBC1D2Q9BYX2 928 aa13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 XPNPEP3Q9NQH7 507 aa13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 ZNF236Q9UL36 1845 aa13.16□□□□□ -0.3
NFKBIA-204ENST00000555371 PTPRZ1P23471 2315 aaPredicted RBP13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 GRM8O00222 908 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 DCXO43602 365 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 CNMDO75829 334 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 HOXC6P09630 235 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 BACE1P56817 501 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 CCNA1P78396 465 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 GRB14Q14449 540 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 METTL24Q5JXM2 366 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 OTOP2Q7RTS6 562 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 TMEM199Q8N511 208 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 GTF3C2Q8WUA4 911 aaPredicted RBP13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
NFKBIA-204ENST00000555371 API5Q9BZZ5 524 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms