RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TTC22Q5TAA0 569 aa14.43□□□□□ -0.1
SRP54-206ENST00000555317 USP17L2Q6R6M4 530 aa14.43□□□□□ -0.1
SRP54-206ENST00000555317 STK11IPQ8N1F8 1099 aa14.43□□□□□ -0.1
SRP54-206ENST00000555317 CD99L2Q8TCZ2 262 aa14.43□□□□□ -0.1
SRP54-206ENST00000555317 FAM227BQ96M60 508 aa14.43□□□□□ -0.1
SRP54-206ENST00000555317 SH2D4AQ9H788 454 aa14.43□□□□□ -0.1
SRP54-206ENST00000555317 EPB41L4AQ9HCS5 686 aaPredicted RBP14.43□□□□□ -0.1
SRP54-206ENST00000555317 SDSP20132 328 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 ICA1Q05084 483 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 PDE4BQ07343 736 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 ZYXQ15942 572 aaKnown RBP14.42□□□□□ -0.1
SRP54-206ENST00000555317 SH3D19Q5HYK7 790 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 CCDC136Q96JN2 1154 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 ARHGEF10LQ9HCE6 1279 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 CPA4Q9UI42 421 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 TRIM17Q9Y577 477 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 ROBO3Q96MS0 1386 aa14.42□□□□□ -0.1
SRP54-206ENST00000555317 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
SRP54-206ENST00000555317 AKR1B1P15121 316 aa14.41□□□□□ -0.1
SRP54-206ENST00000555317 ATP2B2Q01814 1243 aa14.41□□□□□ -0.1
SRP54-206ENST00000555317 CWC27Q6UX04 472 aaKnown RBP14.41□□□□□ -0.1
SRP54-206ENST00000555317 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
SRP54-206ENST00000555317 CAPN15O75808 1086 aa14.4□□□□□ -0.1
SRP54-206ENST00000555317 PPARAQ07869 468 aa14.4□□□□□ -0.1
SRP54-206ENST00000555317 C17orf99Q6UX52 265 aa14.4□□□□□ -0.1
SRP54-206ENST00000555317 ZNF444Q8N0Y2 327 aaPredicted RBP14.4□□□□□ -0.1
SRP54-206ENST00000555317 ABHD8Q96I13 439 aa14.4□□□□□ -0.1
SRP54-206ENST00000555317 KIAA1683Q9H0B3 1180 aa14.4□□□□□ -0.1
SRP54-206ENST00000555317 SMIM22K7EJ46 135 aa14.39□□□□□ -0.11
SRP54-206ENST00000555317 GUCY1A2P33402 732 aa14.39□□□□□ -0.11
SRP54-206ENST00000555317 GCLCP48506 637 aaPredicted RBP14.39□□□□□ -0.11
SRP54-206ENST00000555317 LACTBP83111 547 aaPredicted RBP14.39□□□□□ -0.11
SRP54-206ENST00000555317 OTOP1Q7RTM1 612 aa14.39□□□□□ -0.11
SRP54-206ENST00000555317 ACER1Q8TDN7 264 aa14.39□□□□□ -0.11
SRP54-206ENST00000555317 ASCC2Q9H1I8 757 aaPredicted RBP14.39□□□□□ -0.11
SRP54-206ENST00000555317 KANSL2Q9H9L4 492 aa14.39□□□□□ -0.11
SRP54-206ENST00000555317 ADGRA2Q96PE1 1338 aa14.39□□□□□ -0.11
SRP54-206ENST00000555317 RAD21O60216 631 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 PRDM1O75626 825 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 ECM2O94769 699 aaPredicted RBP14.38□□□□□ -0.11
SRP54-206ENST00000555317 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
SRP54-206ENST00000555317 GNRH1P01148 92 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 HSPD1P10809 573 aaKnown RBP14.38□□□□□ -0.11
SRP54-206ENST00000555317 GSPT1P15170 499 aaKnown RBP14.38□□□□□ -0.11
SRP54-206ENST00000555317 ALX1Q15699 326 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 IFFO2Q5TF58 517 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 VPS53Q5VIR6 699 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 FBXO46Q6PJ61 603 aaPredicted RBP14.38□□□□□ -0.11
SRP54-206ENST00000555317 ZNF589Q86UQ0 364 aaPredicted RBP14.38□□□□□ -0.11
SRP54-206ENST00000555317 ANKRD13CQ8N6S4 541 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 GTF3C2Q8WUA4 911 aaPredicted RBP14.38□□□□□ -0.11
SRP54-206ENST00000555317 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 C12orf42Q96LP6 360 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 EMILIN3Q9NT22 766 aa14.38□□□□□ -0.11
SRP54-206ENST00000555317 USP17L15C9J2P7 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 USP17L13C9JLJ4 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 USP17L11C9JVI0 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 USP17L18D6R9N7 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 TSPY3P0CV98 308 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 TSPY8P0CW00 308 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 BCRP11274 1271 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 VCAM1P19320 739 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 RASA1P20936 1047 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 HOXD10P28358 340 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 HOXA7P31268 230 aaPredicted RBP14.37□□□□□ -0.11
SRP54-206ENST00000555317 PSMC4P43686 418 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 FCGRTP55899 365 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 USP17L24Q0WX57 530 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 FAM110CQ1W6H9 321 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 CLEC10AQ8IUN9 316 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 TANGO6Q9C0B7 1094 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 GOPCQ9HD26 462 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 TOMM22Q9NS69 142 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 ZMYM6O95789 1325 aa14.37□□□□□ -0.11
SRP54-206ENST00000555317 MGAMO43451 1857 aa14.36□□□□□ -0.11
SRP54-206ENST00000555317 CCDC85CA6NKD9 419 aa14.36□□□□□ -0.11
SRP54-206ENST00000555317 EEF2P13639 858 aaKnown RBP14.36□□□□□ -0.11
SRP54-206ENST00000555317 HERVK_113P62684 666 aa14.36□□□□□ -0.11
SRP54-206ENST00000555317 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
SRP54-206ENST00000555317 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
SRP54-206ENST00000555317 PPP4R3BQ5MIZ7 849 aa14.36□□□□□ -0.11
SRP54-206ENST00000555317 CCAR1Q8IX12 1150 aaKnown RBP14.36□□□□□ -0.11
SRP54-206ENST00000555317 LPAR1Q92633 364 aa14.36□□□□□ -0.11
SRP54-206ENST00000555317 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
SRP54-206ENST00000555317 MYH4Q9Y623 1939 aa14.36□□□□□ -0.11
SRP54-206ENST00000555317 RAD50Q92878 1312 aa14.36□□□□□ -0.11
SRP54-206ENST00000555317 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
SRP54-206ENST00000555317 TSPY2A6NKD2 308 aa14.35□□□□□ -0.11
SRP54-206ENST00000555317 FOXP2O15409 715 aa14.35□□□□□ -0.11
SRP54-206ENST00000555317 FGAP02671 866 aa14.35□□□□□ -0.11
SRP54-206ENST00000555317 P2RX7Q99572 595 aaKnown RBP14.35□□□□□ -0.11
SRP54-206ENST00000555317 ARHGAP39Q9C0H5 1083 aa14.35□□□□□ -0.11
SRP54-206ENST00000555317 CWC22Q9HCG8 908 aaKnown RBP14.35□□□□□ -0.11
SRP54-206ENST00000555317 HPS5Q9UPZ3 1129 aa14.35□□□□□ -0.11
SRP54-206ENST00000555317 TMX2Q9Y320 296 aa14.35□□□□□ -0.11
SRP54-206ENST00000555317 GREB1LQ9C091 1923 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms