RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CYP4F22Q6NT55 531 aa16.84■□□□□ 0.29
CHD8-208ENST00000555301 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
CHD8-208ENST00000555301 NEK1Q96PY6 1258 aa16.84■□□□□ 0.29
CHD8-208ENST00000555301 SH2D4AQ9H788 454 aa16.84■□□□□ 0.29
CHD8-208ENST00000555301 ARHGEF10LQ9HCE6 1279 aa16.84■□□□□ 0.29
CHD8-208ENST00000555301 MTMR4Q9NYA4 1195 aa16.84■□□□□ 0.29
CHD8-208ENST00000555301 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.84■□□□□ 0.29
CHD8-208ENST00000555301 FAM155AB1AL88 458 aaPredicted RBP16.83■□□□□ 0.28
CHD8-208ENST00000555301 IRF6O14896 467 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 TTLL1O95922 423 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 MCM5P33992 734 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 HTRA3P83110 453 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 SPP2Q13103 211 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 NOGQ13253 232 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 CCDC84Q86UT8 332 aaPredicted RBP16.83■□□□□ 0.28
CHD8-208ENST00000555301 MB21D2Q8IYB1 491 aaPredicted RBP16.83■□□□□ 0.28
CHD8-208ENST00000555301 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 CAPNS2Q96L46 248 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 TTC14Q96N46 770 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 UBAC1Q9BSL1 405 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 MTA3Q9BTC8 594 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 NYAP2Q9P242 653 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 KCNH4Q9UQ05 1017 aa16.83■□□□□ 0.28
CHD8-208ENST00000555301 LAMA4Q16363 1823 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 C19orf81C9J6K1 198 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 USP17L10C9JJH3 530 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 EEF2P13639 858 aaKnown RBP16.82■□□□□ 0.28
CHD8-208ENST00000555301 GJA5P36382 358 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 NOVP48745 357 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 GTF2A2P52657 109 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 USP14P54578 494 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 BACE1P56817 501 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 GRM1Q13255 1194 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 SNAPC2Q13487 334 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 SART3Q15020 963 aaKnown RBP16.82■□□□□ 0.28
CHD8-208ENST00000555301 ADCK5Q3MIX3 580 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 DGKHQ86XP1 1220 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 ZSCAN10Q96SZ4 725 aaPredicted RBP16.82■□□□□ 0.28
CHD8-208ENST00000555301 C22orf23Q9BZE7 217 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 IL17RBQ9NRM6 502 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 SYNPO2Q9UMS6 1093 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 STX8Q9UNK0 236 aa16.82■□□□□ 0.28
CHD8-208ENST00000555301 WDR33Q9C0J8 1336 aaKnown RBP16.81■□□□□ 0.28
CHD8-208ENST00000555301 ERICH2A1L162 156 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 MANSC4A6NHS7 340 aaPredicted RBP16.81■□□□□ 0.28
CHD8-208ENST00000555301 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
CHD8-208ENST00000555301 CYB5R4Q7L1T6 521 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 SIAH1Q8IUQ4 282 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 NKX2-3Q8TAU0 364 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 MKL1Q969V6 931 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
CHD8-208ENST00000555301 FEZ1Q99689 392 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 KIAA1683Q9H0B3 1180 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 CLIP2Q9UDT6 1046 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 TMX2Q9Y320 296 aa16.81■□□□□ 0.28
CHD8-208ENST00000555301 OTOFQ9HC10 1997 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 TNKSO95271 1327 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 WDR19Q8NEZ3 1342 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 A0A0G2JLL6 359 aaPredicted RBP16.8■□□□□ 0.28
CHD8-208ENST00000555301 A0A1W2PRG0 241 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 NMT2O60551 498 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 CETPP11597 493 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 INHBEP58166 350 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 MTMR2Q13614 643 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 SH3D19Q5HYK7 790 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 DHX32Q7L7V1 743 aaKnown RBP16.8■□□□□ 0.28
CHD8-208ENST00000555301 FASTKD5Q7L8L6 764 aaKnown RBP16.8■□□□□ 0.28
CHD8-208ENST00000555301 PRRT2Q7Z6L0 340 aaPredicted RBP16.8■□□□□ 0.28
CHD8-208ENST00000555301 CLEC10AQ8IUN9 316 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 REM2Q8IYK8 340 aaPredicted RBP16.8■□□□□ 0.28
CHD8-208ENST00000555301 ACER1Q8TDN7 264 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 TMEM87BQ96K49 555 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 ZKSCAN3Q9BRR0 538 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
CHD8-208ENST00000555301 IFIT3O14879 490 aaKnown RBP16.79■□□□□ 0.28
CHD8-208ENST00000555301 PRC1O43663 620 aa16.79■□□□□ 0.28
CHD8-208ENST00000555301 MAP2K2P36507 400 aa16.79■□□□□ 0.28
CHD8-208ENST00000555301 RBM25P49756 843 aaKnown RBP16.79■□□□□ 0.28
CHD8-208ENST00000555301 VEGFBP49765 207 aa16.79■□□□□ 0.28
CHD8-208ENST00000555301 SREBF2Q12772 1141 aa16.79■□□□□ 0.28
CHD8-208ENST00000555301 USP17L2Q6R6M4 530 aa16.79■□□□□ 0.28
CHD8-208ENST00000555301 ANKS1AQ92625 1134 aa16.79■□□□□ 0.28
CHD8-208ENST00000555301 MS4A4AQ96JQ5 239 aa16.79■□□□□ 0.28
CHD8-208ENST00000555301 TMOD4Q9NZQ9 345 aa16.79■□□□□ 0.28
CHD8-208ENST00000555301 CCL15-CCL14A0A0B4J2E2 113 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 TESPA1A2RU30 521 aaPredicted RBP16.78■□□□□ 0.28
CHD8-208ENST00000555301 TOP1P11387 765 aaKnown RBP16.78■□□□□ 0.28
CHD8-208ENST00000555301 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
CHD8-208ENST00000555301 HMGCS2P54868 508 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 ANTXR2P58335 489 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 KIF23Q02241 960 aaPredicted RBP16.78■□□□□ 0.28
CHD8-208ENST00000555301 WTAPQ15007 396 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 CCL15Q16663 113 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 IFIT1BQ5T764 474 aaKnown RBP16.78■□□□□ 0.28
CHD8-208ENST00000555301 RCSD1Q6JBY9 416 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms