RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DDB1Q16531 1140 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 WHAMMP3Q1A5X7 153 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 HSP90B2PQ58FF3 399 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 RAB11FIP4Q86YS3 637 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 PPM1EQ8WY54 764 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 EPB41L4AQ9HCS5 686 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 GEMIN8Q9NWZ8 242 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 SLIT2O94813 1529 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 ERICH2A1L162 156 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 GSG1L2A8MUP6 293 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 AKR1B15C9JRZ8 316 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 CPP00450 1065 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 FECHP22830 423 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 ERCC5P28715 1186 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 CDC27P30260 824 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 PNOCQ13519 176 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 SAFBQ15424 915 aaKnown RBP eCLIP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 KANK3Q6NY19 840 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 TOGARAM2Q6ZUX3 1019 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 MICU3Q86XE3 530 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 CNNM3Q8NE01 707 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 PDE11AQ9HCR9 933 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 VPS18Q9P253 973 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 TTF2Q9UNY4 1162 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 SPATA31A1Q5TZJ5 1347 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 LOC102724428A0A0B4J2F2 783 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 RGL2O15211 777 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 NTSR2O95665 410 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 TDO2P48775 406 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 SIK1P57059 783 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 NR1I3Q14994 352 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 TTC31Q49AM3 519 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 TRIM22Q8IYM9 498 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 FAM177A1Q8N128 213 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 EPC1Q9H2F5 836 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 GNL3LQ9NVN8 582 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 LCMT1Q9UIC8 334 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 SLC4A4Q9Y6R1 1079 aa12.13□□□□□ -0.47
MTHFD1-210ENST00000555252 TRIM66O15016 1216 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 SEMA3EO15041 775 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 CORO7P57737 925 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 WTAPQ15007 396 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 WDR93Q6P2C0 686 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 PDILTQ8N807 584 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 PHLPP1O60346 1717 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 CTAGE9A4FU28 777 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 SARSP49591 514 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 CTDSPL2Q05D32 466 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 CLEC4GQ6UXB4 293 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 PHKBQ93100 1093 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 CTAGE1Q96RT6 745 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 SLC26A6Q9BXS9 759 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 GJB4Q9NTQ9 266 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 LRP2BPQ9P2M1 347 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 DENND2AQ9ULE3 1009 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 NFE2L3Q9Y4A8 694 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 MYH6P13533 1939 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 MYH13Q9UKX3 1938 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 ITIH6Q6UXX5 1313 aa12.12□□□□□ -0.47
MTHFD1-210ENST00000555252 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-210ENST00000555252 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
MTHFD1-210ENST00000555252 CHRNDQ07001 517 aa12.11□□□□□ -0.47
MTHFD1-210ENST00000555252 MORC3Q14149 939 aa12.11□□□□□ -0.47
MTHFD1-210ENST00000555252 RTN1Q16799 776 aa12.11□□□□□ -0.47
MTHFD1-210ENST00000555252 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
MTHFD1-210ENST00000555252 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-210ENST00000555252 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
MTHFD1-210ENST00000555252 CTAGE15A4D2H0 777 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 PPFIA4O75335 1185 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 DEXIO95424 95 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 CTAGE8P0CG41 777 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 PCP11498 1178 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 MARCKSP29966 332 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 BCAMP50895 628 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 UBE4AQ14139 1066 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 CASP8Q14790 479 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 POSTNQ15063 836 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 MAP9Q49MG5 647 aa12.1□□□□□ -0.47
MTHFD1-210ENST00000555252 CTAGE6Q86UF2 777 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms