RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 DDX60LQ5H9U9 1706 aaKnown RBP11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 CYP7A1P22680 504 aa11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 ERVK-9P63128 1117 aa11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 ERVK-24P63145 666 aa11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 MAP3K21Q5TCX8 1036 aa11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 TMED8Q6PL24 325 aaPredicted RBP11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 TXNRD2Q9NNW7 524 aa11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 PIH1D3Q9NQM4 214 aaKnown RBP11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 SAP30BPQ9UHR5 308 aaKnown RBP11.47□□□□□ -0.57
SRP54-AS1-201ENST00000554945 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 ZKSCAN1P17029 563 aaPredicted RBP11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 USP5P45974 858 aa11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 DYNLL1P63167 89 aaKnown RBP11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 SHROOM1Q2M3G4 852 aaPredicted RBP11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 Q3C1V9 767 aa11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 TATDN1Q6P1N9 297 aa11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 FTSJ3Q8IY81 847 aaKnown RBP11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 C7orf61Q8IZ16 206 aa11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 USP6NLQ92738 828 aa11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 GDF15Q99988 308 aa11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 CCDC8Q9H0W5 538 aaPredicted RBP11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 DBNLQ9UJU6 430 aaKnown RBP11.46□□□□□ -0.57
SRP54-AS1-201ENST00000554945 LAMA3Q16787 3333 aa11.46□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 PEX10O60683 326 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 GH2P01242 217 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 RGS2P41220 211 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CACNB2Q08289 660 aaPredicted RBP11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 MORN1Q5T089 497 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 GPR142Q7Z601 462 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 PLEKHH3Q7Z736 793 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 TTC6Q86TZ1 520 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 EAF2Q96CJ1 260 aaPredicted RBP11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 C12orf42Q96LP6 360 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 PAGR1Q9BTK6 254 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 EHD4Q9H223 541 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 C1orf115Q9H7X2 142 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CWC22Q9HCG8 908 aaKnown RBP11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 SERPINB13Q9UIV8 391 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 RABGAP1Q9Y3P9 1069 aa11.45□□□□□ -0.58
SRP54-AS1-201ENST00000554945 SOX1O00570 391 aaPredicted RBP11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 MAP3K13O43283 966 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 GLRX3O76003 335 aaKnown RBP11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 TIE1P35590 1138 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 USP14P54578 494 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CCNA1P78396 465 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 MAP3K12Q12852 859 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CERKLQ49MI3 558 aaPredicted RBP11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 ITPRIPQ8IWB1 547 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 MAGEB6Q8N7X4 407 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 MIGA1Q8NAN2 632 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 LRCH3Q96II8 777 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 FEZ1Q99689 392 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 APBA2Q99767 749 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 PORCNQ9H237 461 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CABP5Q9NP86 173 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 TLR7Q9NYK1 1049 aaKnown RBP11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 ZMYND8Q9ULU4 1186 aaPredicted RBP11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 COL6A3P12111 3177 aa11.44□□□□□ -0.58
SRP54-AS1-201ENST00000554945 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 RAB3GAP1Q15042 981 aa11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 ZYXQ15942 572 aaKnown RBP11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 ABCB5Q2M3G0 1257 aa11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 POTEEQ6S8J3 1075 aa11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 LBX2Q6XYB7 198 aa11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CATSPERGQ6ZRH7 1159 aa11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 ERC1Q8IUD2 1116 aa11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 EDC3Q96F86 508 aaKnown RBP11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 KIAA1683Q9H0B3 1180 aa11.43□□□□□ -0.58
SRP54-AS1-201ENST00000554945 FRMPD3Q5JV73 1810 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 PFASO15067 1338 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 SLC15A5A6NIM6 579 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CNMDO75829 334 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 COL6A1P12109 1028 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 SYN1P17600 705 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CCND3P30281 292 aaPredicted RBP11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 MAGEA10P43363 369 aaPredicted RBP11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 CCL14Q16627 93 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 LRIT3Q3SXY7 679 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 SLC17A8Q8NDX2 589 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 ANTXR1Q9H6X2 564 aa11.42□□□□□ -0.58
SRP54-AS1-201ENST00000554945 DNAH12Q6ZR08 3092 aa11.41□□□□□ -0.58
SRP54-AS1-201ENST00000554945 POLR3DP05423 398 aaPredicted RBP11.41□□□□□ -0.58
SRP54-AS1-201ENST00000554945 RLBP1P12271 317 aa11.41□□□□□ -0.58
SRP54-AS1-201ENST00000554945 VCAM1P19320 739 aa11.41□□□□□ -0.58
SRP54-AS1-201ENST00000554945 PTPREP23469 700 aa11.41□□□□□ -0.58
SRP54-AS1-201ENST00000554945 TTF1Q15361 905 aaPredicted RBP11.41□□□□□ -0.58
SRP54-AS1-201ENST00000554945 HSP90AB4PQ58FF6 505 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms