RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 TXKP42681 527 aa18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 ZKSCAN5Q9Y2L8 839 aa18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 TNS2Q63HR2 1409 aa18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 RASGRP4Q8TDF6 673 aa18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 RGPD8O14715 1765 aaPredicted RBP18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 ZMYM6O95789 1325 aa18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 CCP110O43303 1012 aa18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 PPP1R12BO60237 982 aaPredicted RBP18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 ALAS1P13196 640 aa18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
PPP4R3A-205ENST00000554684 PTGS1P23219 599 aa18.33■□□□□ 0.53
PPP4R3A-205ENST00000554684 CLEC10AQ8IUN9 316 aa18.33■□□□□ 0.53
PPP4R3A-205ENST00000554684 TBC1D10CQ8IV04 446 aa18.33■□□□□ 0.53
PPP4R3A-205ENST00000554684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.33■□□□□ 0.53
PPP4R3A-205ENST00000554684 MED23Q9ULK4 1368 aa18.33■□□□□ 0.53
PPP4R3A-205ENST00000554684 MRPL12P52815 198 aaKnown RBP18.33■□□□□ 0.52
PPP4R3A-205ENST00000554684 RAD51AP2Q09MP3 1159 aa18.33■□□□□ 0.52
PPP4R3A-205ENST00000554684 SLFN13Q68D06 897 aa18.33■□□□□ 0.52
PPP4R3A-205ENST00000554684 VTI1AQ96AJ9 217 aa18.33■□□□□ 0.52
PPP4R3A-205ENST00000554684 ZFYVE27Q5T4F4 411 aa18.33■□□□□ 0.52
PPP4R3A-205ENST00000554684 PLA2G12BQ9BX93 195 aa18.33■□□□□ 0.52
PPP4R3A-205ENST00000554684 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
PPP4R3A-205ENST00000554684 ELP1O95163 1332 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 FLOT1O75955 427 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 DDR1Q08345 913 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 NOM1Q5C9Z4 860 aaKnown RBP18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 DTHD1Q6ZMT9 781 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 TMX1Q9H3N1 280 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 CBX8Q9HC52 389 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 CCNT1O60563 726 aaKnown RBP18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 UBXN2AP68543 259 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 GADL1Q6ZQY3 521 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 STOX1Q6ZVD7 989 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 IFNKQ9P0W0 207 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 TNNT1P13805 278 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 IRX3P78415 501 aaPredicted RBP18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 EHMT1Q9H9B1 1298 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 CLIC4Q9Y696 253 aa18.32■□□□□ 0.52
PPP4R3A-205ENST00000554684 N4BP3O15049 544 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 PPP4R3BQ5MIZ7 849 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 TCERG1LQ5VWI1 586 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 ZFP91Q96JP5 570 aaPredicted RBP18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 DCP1AQ9NPI6 582 aaPredicted RBP18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 GH2P01242 217 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 PGBD1Q96JS3 809 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 MMRN2Q9H8L6 949 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 ARHGAP29Q52LW3 1261 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 MAEAQ7L5Y9 396 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 PCDHA7Q9UN72 937 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 MAPK8IP1Q9UQF2 711 aa18.31■□□□□ 0.52
PPP4R3A-205ENST00000554684 BACH1O14867 736 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 SKILP12757 684 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 MTIF2P46199 727 aaKnown RBP18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 CDK8P49336 464 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 TTC38Q5R3I4 469 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 CERS3Q8IU89 383 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 CAGE1Q8TC20 777 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 TRIM47Q96LD4 638 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 POLLQ9UGP5 575 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 SMCO2A6NFE2 343 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 YEATS4O95619 227 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 ERCC3P19447 782 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 CLIC6Q96NY7 704 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 A0A087WWV3 80 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 CLCN1P35523 988 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 ASIC1P78348 528 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 NOSTRINQ8IVI9 506 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 PDCL3Q9H2J4 239 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 AMPD3Q01432 767 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 CCDC70Q6NSX1 233 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 IQUBQ8NA54 791 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 CRAMP1Q96RY5 1269 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 RRAGDQ9NQL2 400 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 GINS2Q9Y248 185 aa18.3■□□□□ 0.52
PPP4R3A-205ENST00000554684 ZNF609O15014 1411 aa18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 GSDMDP57764 484 aa18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 CCDC84Q86UT8 332 aaPredicted RBP18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 SALL3Q9BXA9 1300 aa18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 NRXN3Q9Y4C0 1643 aa18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 GSG1L2A8MUP6 293 aa18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 ADALQ6DHV7 355 aa18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 PI4KBQ9UBF8 816 aa18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 SH2B2O14492 632 aaPredicted RBP18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 NOLC1Q14978 699 aaKnown RBP eCLIP18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 PPP2R5BQ15173 497 aa18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 CT47A1Q5JQC4 288 aaPredicted RBP18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 SEPT11Q9NVA2 429 aaKnown RBP18.29■□□□□ 0.52
PPP4R3A-205ENST00000554684 CUTAO60888 179 aa18.28■□□□□ 0.52
PPP4R3A-205ENST00000554684 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
PPP4R3A-205ENST00000554684 NSUN4Q96CB9 384 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-205ENST00000554684 PYM1Q9BRP8 204 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-205ENST00000554684 INF2Q27J81 1249 aa18.28■□□□□ 0.52
PPP4R3A-205ENST00000554684 NEDD4P46934 1319 aa18.27■□□□□ 0.52
PPP4R3A-205ENST00000554684 MYCP01106 439 aaPredicted RBP18.27■□□□□ 0.52
PPP4R3A-205ENST00000554684 PFKFB1P16118 471 aa18.27■□□□□ 0.52
PPP4R3A-205ENST00000554684 COA7Q96BR5 231 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms