RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 CBX3Q13185 183 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 ENOX2Q16206 610 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 SMUG1Q53HV7 270 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 FAM228AQ86W67 206 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 TEX9Q8N6V9 391 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 SLC43A3Q8NBI5 491 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 GABPB2Q8TAK5 448 aaPredicted RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 TEKT4Q8WW24 435 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 GCC1Q96CN9 775 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 FAM204AQ9H8W3 233 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 SLC40A1Q9NP59 571 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 FOXD4L1Q9NU39 408 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 NOB1Q9ULX3 412 aaKnown RBP9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 C15orf41Q9Y2V0 281 aa9.63□□□□□ -0.87
HNRNPC-211ENST00000554455 SRRM3A6NNA2 597 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 TBKBP1A7MCY6 615 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 FYB1O15117 783 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 BIRC5O15392 142 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 PDGFRBP09619 1106 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 CCT5P48643 541 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 UBE2HP62256 183 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 ATP2B2Q01814 1243 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 MECOMQ03112 1051 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 SGSM1Q2NKQ1 1148 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 NBPF14Q5TI25 921 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 IQCEQ6IPM2 695 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 GALNT17Q6IS24 598 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 HDGFL2Q7Z4V5 671 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 LMNTD2Q8IXW0 634 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 TMEM57Q8N5G2 664 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 PDILTQ8N807 584 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 SREK1Q8WXA9 508 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 OPTNQ96CV9 577 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 RBM33Q96EV2 1170 aaKnown RBP9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 UIMC1Q96RL1 719 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 SENP7Q9BQF6 1050 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 C6orf203Q9P0P8 240 aaPredicted RBP9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 ZFATQ9P243 1243 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 SLAIN2Q9P270 581 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 DAAM1Q9Y4D1 1078 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 KIF24Q5T7B8 1368 aa9.62□□□□□ -0.87
HNRNPC-211ENST00000554455 ALKQ9UM73 1620 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 WDR46O15213 610 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 ALDH3A1P30838 453 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 ATICP31939 592 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 CA8P35219 290 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 TXLNAP40222 546 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 ETF1P62495 437 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 SULT2A1Q06520 285 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 ARHGEF6Q15052 776 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 INAQ16352 499 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 NAA16Q6N069 864 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 CYB5D1Q6P9G0 228 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 MAATS1Q7Z4T9 603 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 CEP57Q86XR8 500 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 CLASRPQ8N2M8 674 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 MSANTD4Q8NCY6 345 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 TRPC4APQ8TEL6 797 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 MAIP1Q8WWC4 291 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 SMARCC1Q92922 1105 aaPredicted RBP9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 CCDC68Q9H2F9 335 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 VCX3BQ9H321 246 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 GOLPH3LQ9H4A5 285 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 DDX21Q9NR30 783 aaKnown RBP eCLIP9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 COMMD8Q9NX08 183 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 TRMT1Q9NXH9 659 aaKnown RBP9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 GALNT8Q9NY28 637 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 SEL1LQ9UBV2 794 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 L1RE1Q9UN81 338 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 ZNF148Q9UQR1 794 aa9.61□□□□□ -0.87
HNRNPC-211ENST00000554455 FAM25EA8MYX2 175 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 EIF3HO15372 352 aaKnown RBP eCLIP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 P4HA2O15460 535 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CLASP2O75122 1294 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 TGFB3P10600 412 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 ATP4AP20648 1035 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CCT6AP40227 531 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CMPK2Q5EBM0 449 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 PRPF40BQ6NWY9 871 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 SLC7A5P1Q8MH63 180 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CCDC155Q8N6L0 562 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CTNNBL1Q8WYA6 563 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 LRRC45Q96CN5 670 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 HVCN1Q96D96 273 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 INTS4Q96HW7 963 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 TTC14Q96N46 770 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 PRAM1Q96QH2 718 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 SMC6Q96SB8 1091 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 TCHPQ9BT92 498 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 SLC7A5P2Q9GIP4 190 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 NLRP2Q9NX02 1062 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CDHR2Q9BYE9 1310 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 MYO5BQ9ULV0 1848 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CDK12Q9NYV4 1490 aaPredicted RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 CCDC162PA2VCL2 907 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 RASSF10A6NK89 507 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 SART1O43290 800 aaKnown RBP9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 STAM2O75886 525 aa9.6□□□□□ -0.87
HNRNPC-211ENST00000554455 FAM69CQ0P6D2 419 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms