RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 CCDC87Q9NVE4 849 aa12.97□□□□□ -0.33
PTPN21-205ENST00000554270 KCNQ2O43526 872 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 FMNL1O95466 1100 aaPredicted RBP12.96□□□□□ -0.33
PTPN21-205ENST00000554270 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTPN21-205ENST00000554270 KRT9P35527 623 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 RESP18Q5W5W9 173 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 DZIP1Q86YF9 867 aaKnown RBP12.96□□□□□ -0.33
PTPN21-205ENST00000554270 MLKLQ8NB16 471 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 FAM217BQ9NTX9 383 aaPredicted RBP12.96□□□□□ -0.33
PTPN21-205ENST00000554270 MROH5Q6ZUA9 1318 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 IFNAR1P17181 557 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 ST5P78524 1137 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 PTPAQ15257 358 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTPN21-205ENST00000554270 TRIM47Q96LD4 638 aa12.96□□□□□ -0.33
PTPN21-205ENST00000554270 SAP30BPQ9UHR5 308 aaKnown RBP12.96□□□□□ -0.33
PTPN21-205ENST00000554270 MST1RQ04912 1400 aa12.96□□□□□ -0.34
PTPN21-205ENST00000554270 JCADQ9P266 1359 aa12.96□□□□□ -0.34
PTPN21-205ENST00000554270 PPP6R2O75170 966 aa12.96□□□□□ -0.34
PTPN21-205ENST00000554270 CAPN2P17655 700 aa12.96□□□□□ -0.34
PTPN21-205ENST00000554270 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.34
PTPN21-205ENST00000554270 SUGCTQ9HAC7 445 aa12.96□□□□□ -0.34
PTPN21-205ENST00000554270 CTAGE9A4FU28 777 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
PTPN21-205ENST00000554270 PTGDRQ13258 359 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 DNAJC21Q5F1R6 531 aaKnown RBP12.95□□□□□ -0.34
PTPN21-205ENST00000554270 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
PTPN21-205ENST00000554270 TFR2Q9UP52 801 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 ERLIN1O75477 346 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 SYCP1Q15431 976 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 HEATR3Q7Z4Q2 680 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 SLC35F6Q8N357 371 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 SRRTQ9BXP5 876 aaKnown RBP12.95□□□□□ -0.34
PTPN21-205ENST00000554270 TANGO6Q9C0B7 1094 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 MRPL44Q9H9J2 332 aaKnown RBP12.95□□□□□ -0.34
PTPN21-205ENST00000554270 JADE2Q9NQC1 790 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 RGPD5Q99666 1765 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 TRIM28Q13263 835 aaKnown RBP12.95□□□□□ -0.34
PTPN21-205ENST00000554270 NTRK3Q16288 839 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 ERFEQ4G0M1 354 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 EARS2Q5JPH6 523 aaKnown RBP12.95□□□□□ -0.34
PTPN21-205ENST00000554270 ZHX3Q9H4I2 956 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
PTPN21-205ENST00000554270 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 MACROD2A1Z1Q3 448 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 CTAGE15A4D2H0 777 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 CTAGE8P0CG41 777 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 BMP6P22004 513 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 STAT6P42226 847 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 SIK1P57059 783 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 CTAGE6Q86UF2 777 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 CTAGE4Q8IX94 777 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 DEF6Q9H4E7 631 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
PTPN21-205ENST00000554270 EFCAB8A8MWE9 144 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 UBA7P41226 1012 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 TTC38Q5R3I4 469 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
PTPN21-205ENST00000554270 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 CPDO75976 1380 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 CCDC194A0A1B0GVG4 234 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 GOLGA6L9A6NEM1 432 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 TRIM21P19474 475 aaKnown RBP12.94□□□□□ -0.34
PTPN21-205ENST00000554270 KANK3Q6NY19 840 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 TMTC2Q8N394 836 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 ZSCAN10Q96SZ4 725 aaPredicted RBP12.94□□□□□ -0.34
PTPN21-205ENST00000554270 RSPH14Q9UHP6 348 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
PTPN21-205ENST00000554270 IDEP14735 1019 aa12.93□□□□□ -0.34
PTPN21-205ENST00000554270 KLRK1P26718 216 aa12.93□□□□□ -0.34
PTPN21-205ENST00000554270 LIFRP42702 1097 aa12.93□□□□□ -0.34
PTPN21-205ENST00000554270 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
PTPN21-205ENST00000554270 REXO1L1PQ8IX06 675 aa12.93□□□□□ -0.34
PTPN21-205ENST00000554270 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
PTPN21-205ENST00000554270 MAP3K14Q99558 947 aa12.93□□□□□ -0.34
PTPN21-205ENST00000554270 VEGFAP15692 232 aaPredicted RBP12.93□□□□□ -0.34
PTPN21-205ENST00000554270 PRDX5P30044 214 aa12.93□□□□□ -0.34
PTPN21-205ENST00000554270 MTIF2P46199 727 aaKnown RBP12.93□□□□□ -0.34
PTPN21-205ENST00000554270 NCAPH2Q6IBW4 605 aa12.93□□□□□ -0.34
PTPN21-205ENST00000554270 CELF1Q92879 486 aaKnown RBP12.93□□□□□ -0.34
PTPN21-205ENST00000554270 ZNHIT6Q9NWK9 470 aaKnown RBP12.93□□□□□ -0.34
PTPN21-205ENST00000554270 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
PTPN21-205ENST00000554270 STX10O60499 249 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 GNAT2P19087 354 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 PTPREP23469 700 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
PTPN21-205ENST00000554270 LONRF2Q1L5Z9 754 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 DYNLL2Q96FJ2 89 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 KAT14Q9H8E8 782 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 TADA3O75528 432 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 PLA2G4AP47712 749 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 TC2NQ8N9U0 490 aa12.92□□□□□ -0.34
PTPN21-205ENST00000554270 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms