RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 LRRC41Q15345 812 aa20.96■□□□□ 0.95
NEK9-204ENST00000554258 SUCLG2Q96I99 432 aa20.96■□□□□ 0.95
NEK9-204ENST00000554258 WDR18Q9BV38 432 aa20.96■□□□□ 0.95
NEK9-204ENST00000554258 IVNS1ABPQ9Y6Y0 642 aa20.96■□□□□ 0.95
NEK9-204ENST00000554258 LRRC37A2A6NM11 1700 aa20.95■□□□□ 0.94
NEK9-204ENST00000554258 SMIM22K7EJ46 135 aa20.95■□□□□ 0.94
NEK9-204ENST00000554258 RRP1BQ14684 758 aaKnown RBP20.95■□□□□ 0.94
NEK9-204ENST00000554258 NPLOC4Q8TAT6 608 aa20.95■□□□□ 0.94
NEK9-204ENST00000554258 MSRAQ9UJ68 235 aa20.95■□□□□ 0.94
NEK9-204ENST00000554258 RAB30Q15771 203 aa20.94■□□□□ 0.94
NEK9-204ENST00000554258 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
NEK9-204ENST00000554258 SALL1Q9NSC2 1324 aa20.94■□□□□ 0.94
NEK9-204ENST00000554258 SMCHD1A6NHR9 2005 aa20.94■□□□□ 0.94
NEK9-204ENST00000554258 C19orf81C9J6K1 198 aa20.93■□□□□ 0.94
NEK9-204ENST00000554258 ERC2O15083 957 aa20.93■□□□□ 0.94
NEK9-204ENST00000554258 SEPT4O43236 478 aa20.93■□□□□ 0.94
NEK9-204ENST00000554258 BTDP43251 543 aa20.93■□□□□ 0.94
NEK9-204ENST00000554258 CCDC174Q6PII3 467 aa20.93■□□□□ 0.94
NEK9-204ENST00000554258 DZIP1Q86YF9 867 aaKnown RBP20.93■□□□□ 0.94
NEK9-204ENST00000554258 SLC44A5Q8NCS7 719 aa20.93■□□□□ 0.94
NEK9-204ENST00000554258 KAZALD1Q96I82 304 aa20.93■□□□□ 0.94
NEK9-204ENST00000554258 RABGAP1Q9Y3P9 1069 aa20.93■□□□□ 0.94
NEK9-204ENST00000554258 EXOSC9Q06265 439 aaKnown RBP20.92■□□□□ 0.94
NEK9-204ENST00000554258 GRB14Q14449 540 aa20.92■□□□□ 0.94
NEK9-204ENST00000554258 SLF2Q8IX21 1173 aa20.92■□□□□ 0.94
NEK9-204ENST00000554258 LPIN2Q92539 896 aa20.92■□□□□ 0.94
NEK9-204ENST00000554258 KHSRPQ92945 711 aaKnown RBP eCLIP20.92■□□□□ 0.94
NEK9-204ENST00000554258 SLC28A3Q9HAS3 691 aa20.92■□□□□ 0.94
NEK9-204ENST00000554258 GNL3LQ9NVN8 582 aaKnown RBP20.92■□□□□ 0.94
NEK9-204ENST00000554258 PHF24Q9UPV7 400 aa20.92■□□□□ 0.94
NEK9-204ENST00000554258 USP17L10C9JJH3 530 aa20.91■□□□□ 0.94
NEK9-204ENST00000554258 KLHDC4Q8TBB5 520 aa20.91■□□□□ 0.94
NEK9-204ENST00000554258 HERVK_113Q902F9 699 aa20.91■□□□□ 0.94
NEK9-204ENST00000554258 NKX2-4Q9H2Z4 354 aa20.91■□□□□ 0.94
NEK9-204ENST00000554258 ASNSP08243 561 aa20.9■□□□□ 0.94
NEK9-204ENST00000554258 FAM47AQ5JRC9 791 aa20.9■□□□□ 0.94
NEK9-204ENST00000554258 TMEM240Q5SV17 173 aa20.9■□□□□ 0.94
NEK9-204ENST00000554258 ZGPATQ8N5A5 531 aaKnown RBP20.9■□□□□ 0.94
NEK9-204ENST00000554258 BICC1Q9H694 974 aaKnown RBP20.9■□□□□ 0.94
NEK9-204ENST00000554258 ZDBF2Q9HCK1 2354 aa20.89■□□□□ 0.94
NEK9-204ENST00000554258 VAMP4O75379 141 aa20.89■□□□□ 0.93
NEK9-204ENST00000554258 CNMDO75829 334 aa20.89■□□□□ 0.93
NEK9-204ENST00000554258 ALDH1L1O75891 902 aa20.89■□□□□ 0.93
NEK9-204ENST00000554258 IGHA2P01877 340 aa20.89■□□□□ 0.93
NEK9-204ENST00000554258 NHLH1Q02575 133 aa20.89■□□□□ 0.93
NEK9-204ENST00000554258 PPIGQ13427 754 aaKnown RBP eCLIP20.89■□□□□ 0.933e-6■■□□□ 13.6
NEK9-204ENST00000554258 RASIP1Q5U651 963 aa20.89■□□□□ 0.93
NEK9-204ENST00000554258 DPP9Q86TI2 863 aa20.89■□□□□ 0.93
NEK9-204ENST00000554258 DENND2AQ9ULE3 1009 aa20.89■□□□□ 0.93
NEK9-204ENST00000554258 DCDC2CA8MYV0 355 aa20.88■□□□□ 0.93
NEK9-204ENST00000554258 PRR33A8MZF0 331 aa20.88■□□□□ 0.93
NEK9-204ENST00000554258 NPM3O75607 178 aaKnown RBP20.88■□□□□ 0.93
NEK9-204ENST00000554258 TIMP1P01033 207 aa20.88■□□□□ 0.93
NEK9-204ENST00000554258 FAAP100Q0VG06 881 aa20.88■□□□□ 0.93
NEK9-204ENST00000554258 RABL6Q3YEC7 729 aaPredicted RBP20.88■□□□□ 0.93
NEK9-204ENST00000554258 OLFML2BQ68BL8 750 aa20.88■□□□□ 0.93
NEK9-204ENST00000554258 C16orf59Q7L2K0 433 aa20.88■□□□□ 0.93
NEK9-204ENST00000554258 FAM163AQ96GL9 167 aaPredicted RBP20.88■□□□□ 0.93
NEK9-204ENST00000554258 HERC5Q9UII4 1024 aaKnown RBP20.88■□□□□ 0.93
NEK9-204ENST00000554258 BRWD1Q9NSI6 2320 aa20.88■□□□□ 0.93
NEK9-204ENST00000554258 PI4K2BG5E9Z4 385 aa20.87■□□□□ 0.93
NEK9-204ENST00000554258 TLL1O43897 1013 aa20.87■□□□□ 0.93
NEK9-204ENST00000554258 CT47B1P0C2W7 299 aaPredicted RBP20.87■□□□□ 0.93
NEK9-204ENST00000554258 MFSD5Q6N075 450 aa20.87■□□□□ 0.93
NEK9-204ENST00000554258 MROH7-TTC4A0A0A0MT08 1334 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 A0A1W2PQ45 241 aaPredicted RBP20.86■□□□□ 0.93
NEK9-204ENST00000554258 A0A1W2PQY0 241 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 SEMA3EO15041 775 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 NBPF7P0C2Y1 421 aaPredicted RBP20.86■□□□□ 0.93
NEK9-204ENST00000554258 RHBDL3P58872 404 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 PRAMEF19Q5SWL8 479 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 SLC4A10Q6U841 1118 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 TOX2Q96NM4 488 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 UIMC1Q96RL1 719 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 SRCIN1Q9C0H9 1055 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 XPNPEP3Q9NQH7 507 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 ABCF2Q9UG63 623 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 COG5Q9UP83 839 aa20.86■□□□□ 0.93
NEK9-204ENST00000554258 ZNF236Q9UL36 1845 aa20.85■□□□□ 0.93
NEK9-204ENST00000554258 PSRC1Q6PGN9 363 aaPredicted RBP20.85■□□□□ 0.93
NEK9-204ENST00000554258 ZNF365Q70YC5 407 aa20.85■□□□□ 0.93
NEK9-204ENST00000554258 ANKRD33Q7Z3H0 272 aa20.85■□□□□ 0.93
NEK9-204ENST00000554258 RNF180Q86T96 592 aa20.85■□□□□ 0.93
NEK9-204ENST00000554258 EMILIN3Q9NT22 766 aa20.85■□□□□ 0.93
NEK9-204ENST00000554258 YBX2Q9Y2T7 364 aaKnown RBP20.85■□□□□ 0.93
NEK9-204ENST00000554258 CFAP54Q96N23 3096 aa20.85■□□□□ 0.93
NEK9-204ENST00000554258 GPR75-ASB3A0A0A6YYF3 556 aa20.84■□□□□ 0.93
NEK9-204ENST00000554258 ADORA2AP29274 412 aa20.84■□□□□ 0.93
NEK9-204ENST00000554258 USP17L2Q6R6M4 530 aa20.84■□□□□ 0.93
NEK9-204ENST00000554258 ANKRD44Q8N8A2 993 aa20.84■□□□□ 0.93
NEK9-204ENST00000554258 SIPA1L1O43166 1804 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L15C9J2P7 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L13C9JLJ4 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L11C9JVI0 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L18D6R9N7 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L22D6RA61 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L17D6RBQ6 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L19D6RCP7 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 USP17L20D6RJB6 530 aa20.83■□□□□ 0.93
NEK9-204ENST00000554258 APBB1O00213 710 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms