RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 COX4I2Q96KJ9 171 aa8.02□□□□□ -1.13
ATXN3-225ENST00000554214 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
ATXN3-225ENST00000554214 METTL5Q9NRN9 209 aaKnown RBP8.02□□□□□ -1.13
ATXN3-225ENST00000554214 PCDHB14Q9Y5E9 798 aa8.02□□□□□ -1.13
ATXN3-225ENST00000554214 CAPN6Q9Y6Q1 641 aa8.02□□□□□ -1.13
ATXN3-225ENST00000554214 APOBRQ0VD83 1088 aa8.01□□□□□ -1.13
ATXN3-225ENST00000554214 IKZF1Q13422 519 aa8.01□□□□□ -1.13
ATXN3-225ENST00000554214 MLECQ14165 292 aa8.01□□□□□ -1.13
ATXN3-225ENST00000554214 ZNF792Q3KQV3 632 aa8.01□□□□□ -1.13
ATXN3-225ENST00000554214 ANGEL2Q5VTE6 544 aaKnown RBP8.01□□□□□ -1.13
ATXN3-225ENST00000554214 CBLL1Q75N03 491 aa8.01□□□□□ -1.13
ATXN3-225ENST00000554214 RGS22Q8NE09 1264 aa8.01□□□□□ -1.13
ATXN3-225ENST00000554214 RNF34Q969K3 372 aa8.01□□□□□ -1.13
ATXN3-225ENST00000554214 SPON2Q9BUD6 331 aa8.01□□□□□ -1.13
ATXN3-225ENST00000554214 SLC22A31A6NKX4 558 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 DNAJA2O60884 412 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 VAMP1P23763 118 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 MCM4P33991 863 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 KIR3DL1P43629 444 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 TNNI2P48788 182 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 USP48Q86UV5 1035 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 KIAA0825Q8IV33 1275 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 BAHD1Q8TBE0 780 aaPredicted RBP8□□□□□ -1.13
ATXN3-225ENST00000554214 NKD1Q969G9 470 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 EAF1Q96JC9 268 aaPredicted RBP8□□□□□ -1.13
ATXN3-225ENST00000554214 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 KIF2CQ99661 725 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 NT5C1AQ9BXI3 368 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 SEMA3GQ9NS98 782 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 ST14Q9Y5Y6 855 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 PITPNM2Q9BZ72 1349 aa8□□□□□ -1.13
ATXN3-225ENST00000554214 H3BS24 57 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 ATE1O95260 518 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 CLCQ05315 142 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 ZP2Q05996 745 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 TNK2Q07912 1038 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 ZNF394Q53GI3 561 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 PHACTR4Q8IZ21 702 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 UBE2FQ969M7 185 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 MRRFQ96E11 262 aaKnown RBP7.99□□□□□ -1.13
ATXN3-225ENST00000554214 EHMT1Q9H9B1 1298 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 ATP13A1Q9HD20 1204 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 MBNL3Q9NUK0 354 aaKnown RBP7.99□□□□□ -1.13
ATXN3-225ENST00000554214 ZSWIM5Q9P217 1185 aa7.99□□□□□ -1.13
ATXN3-225ENST00000554214 SCAMP3O14828 347 aaKnown RBP7.98□□□□□ -1.13
ATXN3-225ENST00000554214 RNASE1P07998 156 aaKnown RBP7.98□□□□□ -1.13
ATXN3-225ENST00000554214 GBP1P32455 592 aa7.98□□□□□ -1.13
ATXN3-225ENST00000554214 SLC23A3Q6PIS1 610 aa7.98□□□□□ -1.13
ATXN3-225ENST00000554214 GK5Q6ZS86 529 aa7.98□□□□□ -1.13
ATXN3-225ENST00000554214 PRDM7Q9NQW5 492 aa7.98□□□□□ -1.13
ATXN3-225ENST00000554214 ADAMTS6Q9UKP5 1117 aa7.98□□□□□ -1.13
ATXN3-225ENST00000554214 RECKO95980 971 aa7.97□□□□□ -1.13
ATXN3-225ENST00000554214 ZNF165P49910 485 aa7.97□□□□□ -1.13
ATXN3-225ENST00000554214 ARSHQ5FYA8 562 aa7.97□□□□□ -1.13
ATXN3-225ENST00000554214 SLITRK4Q8IW52 837 aa7.97□□□□□ -1.13
ATXN3-225ENST00000554214 REXO1Q8N1G1 1221 aaKnown RBP7.97□□□□□ -1.13
ATXN3-225ENST00000554214 PIWIL2Q8TC59 973 aaKnown RBP7.97□□□□□ -1.13
ATXN3-225ENST00000554214 Q96M66 194 aa7.97□□□□□ -1.13
ATXN3-225ENST00000554214 LMCD1Q9NZU5 365 aa7.97□□□□□ -1.13
ATXN3-225ENST00000554214 PCDHGB7Q9Y5F8 929 aa7.97□□□□□ -1.13
ATXN3-225ENST00000554214 UNC13AQ9UPW8 1703 aa7.96□□□□□ -1.14
ATXN3-225ENST00000554214 LRRN2O75325 713 aa7.96□□□□□ -1.14
ATXN3-225ENST00000554214 CHMP4BP1P59074 171 aa7.96□□□□□ -1.14
ATXN3-225ENST00000554214 RACK1P63244 317 aaKnown RBP7.96□□□□□ -1.14
ATXN3-225ENST00000554214 THAP5Q7Z6K1 395 aa7.96□□□□□ -1.14
ATXN3-225ENST00000554214 RC3H2Q9HBD1 1191 aaKnown RBP7.96□□□□□ -1.14
ATXN3-225ENST00000554214 GMIPQ9P107 970 aa7.96□□□□□ -1.14
ATXN3-225ENST00000554214 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.14
ATXN3-225ENST00000554214 CCDC9Q9Y3X0 531 aaKnown RBP7.96□□□□□ -1.14
ATXN3-225ENST00000554214 UNCXA6NJT0 531 aa7.95□□□□□ -1.14
ATXN3-225ENST00000554214 RGS13O14921 159 aa7.95□□□□□ -1.14
ATXN3-225ENST00000554214 PAX4O43316 350 aa7.95□□□□□ -1.14
ATXN3-225ENST00000554214 RAG1P15918 1043 aa7.95□□□□□ -1.14
ATXN3-225ENST00000554214 KREMEN1Q96MU8 473 aa7.95□□□□□ -1.14
ATXN3-225ENST00000554214 DUSP15Q9H1R2 295 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-225ENST00000554214 CARS2Q9HA77 564 aaKnown RBP7.95□□□□□ -1.14
ATXN3-225ENST00000554214 KIAA1522Q9P206 1035 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-225ENST00000554214 DDX41Q9UJV9 622 aaKnown RBP7.95□□□□□ -1.14
ATXN3-225ENST00000554214 WASH4PA8MWX3 477 aa7.94□□□□□ -1.14
ATXN3-225ENST00000554214 LRRN4CLQ8ND94 238 aa7.94□□□□□ -1.14
ATXN3-225ENST00000554214 RNF141Q8WVD5 230 aa7.94□□□□□ -1.14
ATXN3-225ENST00000554214 ATG4CQ96DT6 458 aa7.94□□□□□ -1.14
ATXN3-225ENST00000554214 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
ATXN3-225ENST00000554214 BIN1O00499 593 aa7.93□□□□□ -1.14
ATXN3-225ENST00000554214 JUNBP17275 347 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-225ENST00000554214 ITGB5P18084 799 aa7.93□□□□□ -1.14
ATXN3-225ENST00000554214 LRRFIP1Q32MZ4 808 aaKnown RBP7.93□□□□□ -1.14
ATXN3-225ENST00000554214 CDCP2Q5VXM1 449 aa7.93□□□□□ -1.14
ATXN3-225ENST00000554214 C9orf131Q5VYM1 1079 aa7.93□□□□□ -1.14
ATXN3-225ENST00000554214 METTL16Q86W50 562 aaKnown RBP7.93□□□□□ -1.14
ATXN3-225ENST00000554214 ZNF654Q8IZM8 581 aa7.93□□□□□ -1.14
ATXN3-225ENST00000554214 DTWD2Q8NBA8 298 aa7.93□□□□□ -1.14
ATXN3-225ENST00000554214 CNNM2Q9H8M5 875 aa7.93□□□□□ -1.14
ATXN3-225ENST00000554214 GPATCH2Q9NW75 528 aa7.93□□□□□ -1.14
ATXN3-225ENST00000554214 UBOX5O94941 541 aa7.92□□□□□ -1.14
ATXN3-225ENST00000554214 OVOS1Q6IE37 1185 aa7.92□□□□□ -1.14
ATXN3-225ENST00000554214 ATG4DQ86TL0 474 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-225ENST00000554214 ASIC4Q96FT7 647 aa7.92□□□□□ -1.14
ATXN3-225ENST00000554214 TRIT1Q9H3H1 467 aaKnown RBP7.92□□□□□ -1.14
ATXN3-225ENST00000554214 TPP2P29144 1249 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms