RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SYN1P17600 705 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 HOXA7P31268 230 aaPredicted RBP10.75□□□□□ -0.69
TDP1-208ENST00000553989 RGS2P41220 211 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 ERVK-24P63145 666 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 JAG1P78504 1218 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 USP17L2Q6R6M4 530 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 MAGEB6Q8N7X4 407 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 SSH3Q8TE77 659 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 PRO3102Q9H379 93 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 TXNRD2Q9NNW7 524 aa10.75□□□□□ -0.69
TDP1-208ENST00000553989 TLR7Q9NYK1 1049 aaKnown RBP10.75□□□□□ -0.69
TDP1-208ENST00000553989 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
TDP1-208ENST00000553989 SIPA1L1O43166 1804 aa10.74□□□□□ -0.69
TDP1-208ENST00000553989 GTPBP6O43824 516 aaPredicted RBP10.74□□□□□ -0.69
TDP1-208ENST00000553989 IGSF3O75054 1194 aa10.74□□□□□ -0.69
TDP1-208ENST00000553989 GPR142Q7Z601 462 aa10.74□□□□□ -0.69
TDP1-208ENST00000553989 CERS3Q8IU89 383 aa10.74□□□□□ -0.69
TDP1-208ENST00000553989 TRMT44Q8IYL2 757 aaKnown RBP10.74□□□□□ -0.69
TDP1-208ENST00000553989 LRCH3Q96II8 777 aa10.74□□□□□ -0.69
TDP1-208ENST00000553989 ZNF512BQ96KM6 892 aaPredicted RBP10.74□□□□□ -0.69
TDP1-208ENST00000553989 APBA2Q99767 749 aa10.74□□□□□ -0.69
TDP1-208ENST00000553989 SERPINB13Q9UIV8 391 aa10.74□□□□□ -0.69
TDP1-208ENST00000553989 NDUFB9Q9Y6M9 179 aa10.74□□□□□ -0.69
TDP1-208ENST00000553989 DDX60LQ5H9U9 1706 aaKnown RBP10.73□□□□□ -0.69
TDP1-208ENST00000553989 SOX1O00570 391 aaPredicted RBP10.73□□□□□ -0.69
TDP1-208ENST00000553989 XRCC5P13010 732 aaKnown RBP10.73□□□□□ -0.69
TDP1-208ENST00000553989 CCNA1P78396 465 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 MAP3K12Q12852 859 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 PLEKHH3Q7Z736 793 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 TTC6Q86TZ1 520 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 AACSQ86V21 672 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 METTL16Q86W50 562 aaKnown RBP10.73□□□□□ -0.69
TDP1-208ENST00000553989 RASEFQ8IZ41 740 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 BCL11AQ9H165 835 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 PORCNQ9H237 461 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 CABP5Q9NP86 173 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 EMILIN3Q9NT22 766 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 RBPJLQ9UBG7 517 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 OGDHLQ9ULD0 1010 aa10.73□□□□□ -0.69
TDP1-208ENST00000553989 FOCADQ5VW36 1801 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L15C9J2P7 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L13C9JLJ4 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L11C9JVI0 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L18D6R9N7 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L22D6RA61 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L17D6RBQ6 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L19D6RCP7 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L20D6RJB6 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 GLRX3O76003 335 aaKnown RBP10.72□□□□□ -0.69
TDP1-208ENST00000553989 POLR3DP05423 398 aaPredicted RBP10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP14P54578 494 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 CACNB2Q08289 660 aaPredicted RBP10.72□□□□□ -0.69
TDP1-208ENST00000553989 USP17L24Q0WX57 530 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 ABCB5Q2M3G0 1257 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 Q3C1V9 767 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 CERKLQ49MI3 558 aaPredicted RBP10.72□□□□□ -0.69
TDP1-208ENST00000553989 MAP3K21Q5TCX8 1036 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 ERC1Q8IUD2 1116 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 SLC17A8Q8NDX2 589 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 EAF2Q96CJ1 260 aaPredicted RBP10.72□□□□□ -0.69
TDP1-208ENST00000553989 EXOC6BQ9Y2D4 811 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 NOP58Q9Y2X3 529 aaKnown RBP10.72□□□□□ -0.69
TDP1-208ENST00000553989 IVNS1ABPQ9Y6Y0 642 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
TDP1-208ENST00000553989 MPHOSPH10O00566 681 aaKnown RBP10.71□□□□□ -0.69
TDP1-208ENST00000553989 PLXNB2O15031 1838 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 VCAM1P19320 739 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 CNGA1P29973 690 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 CCND3P30281 292 aaPredicted RBP10.71□□□□□ -0.69
TDP1-208ENST00000553989 MAGEA10P43363 369 aaPredicted RBP10.71□□□□□ -0.69
TDP1-208ENST00000553989 MAP2K5Q13163 448 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 CCL14Q16627 93 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 MORN1Q5T089 497 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 MFSD14CQ5VZR4 134 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 ALPK3Q96L96 1907 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 GDF15Q99988 308 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 UBE2OQ9C0C9 1292 aaKnown RBP10.71□□□□□ -0.69
TDP1-208ENST00000553989 EHD4Q9H223 541 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 ANTXR1Q9H6X2 564 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 RYDENQ9NUL5 291 aaKnown RBP10.71□□□□□ -0.69
TDP1-208ENST00000553989 RABGAP1Q9Y3P9 1069 aa10.71□□□□□ -0.69
TDP1-208ENST00000553989 MYH1P12882 1939 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
TDP1-208ENST00000553989 PFASO15067 1338 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 APBB1O00213 710 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 RLBP1P12271 317 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 BMP8BP34820 402 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 TTF1Q15361 905 aaPredicted RBP10.7□□□□□ -0.7
TDP1-208ENST00000553989 TATDN1Q6P1N9 297 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 CEP85Q6P2H3 762 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 TDHQ8IZJ6 230 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 EDC3Q96F86 508 aaKnown RBP10.7□□□□□ -0.7
TDP1-208ENST00000553989 C12orf42Q96LP6 360 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 RPAP3Q9H6T3 665 aaPredicted RBP10.7□□□□□ -0.7
TDP1-208ENST00000553989 IL1RAPL2Q9NP60 686 aa10.7□□□□□ -0.7
TDP1-208ENST00000553989 IRX6P78412 446 aaPredicted RBP10.69□□□□□ -0.7
TDP1-208ENST00000553989 ATP2B2Q01814 1243 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms