RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 STX17P56962 302 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 ZNF174Q15697 407 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 FAM47AQ5JRC9 791 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 CTR9Q6PD62 1173 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 TMEM139Q8IV31 216 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-211ENST00000553882 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-211ENST00000553882 STAMQ92783 540 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 AATFQ9NY61 560 aaKnown RBP eCLIP16.63■□□□□ 0.25
ACTN1-211ENST00000553882 OGFRQ9NZT2 677 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 ZNF18P17022 549 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 TROAPQ12815 778 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 UBE4AQ14139 1066 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
ACTN1-211ENST00000553882 DDX41Q9UJV9 622 aaKnown RBP16.63■□□□□ 0.25
ACTN1-211ENST00000553882 PRDM4Q9UKN5 801 aa16.63■□□□□ 0.25
ACTN1-211ENST00000553882 NUTM2BA6NNL0 878 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-211ENST00000553882 NUTM2EB1AL46 878 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-211ENST00000553882 TRIM65Q6PJ69 517 aa16.62■□□□□ 0.25
ACTN1-211ENST00000553882 NUTM2AQ8IVF1 878 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-211ENST00000553882 ELOA2Q8IYF1 753 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-211ENST00000553882 ENOX1Q8TC92 643 aaKnown RBP16.62■□□□□ 0.25
ACTN1-211ENST00000553882 BAG1Q99933 345 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-211ENST00000553882 BSDC1Q9NW68 430 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-211ENST00000553882 TFCP2L1Q9NZI6 479 aa16.62■□□□□ 0.25
ACTN1-211ENST00000553882 DACH1Q9UI36 760 aa16.62■□□□□ 0.25
ACTN1-211ENST00000553882 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
ACTN1-211ENST00000553882 SPECC1LQ69YQ0 1117 aa16.62■□□□□ 0.25
ACTN1-211ENST00000553882 REXO1L1PQ8IX06 675 aa16.62■□□□□ 0.25
ACTN1-211ENST00000553882 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-211ENST00000553882 CACNA1SQ13698 1873 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 PPP2R2CQ9Y2T4 447 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.61■□□□□ 0.25
ACTN1-211ENST00000553882 ARHGAP6O43182 974 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 PRPF3O43395 683 aaKnown RBP16.61■□□□□ 0.25
ACTN1-211ENST00000553882 MYO1BO43795 1136 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 COBLO75128 1261 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 URI1O94763 535 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-211ENST00000553882 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-211ENST00000553882 MECOMQ03112 1051 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 DMTNQ08495 405 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 KANK3Q6NY19 840 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 TC2NQ8N9U0 490 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-211ENST00000553882 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
ACTN1-211ENST00000553882 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 CCP110O43303 1012 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 CYP2D6P10635 497 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
ACTN1-211ENST00000553882 PRDX5P30044 214 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 PLCD1P51178 756 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 TOGARAM2Q6ZUX3 1019 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 LINC00116Q8NCU8 138 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 TBX2Q13207 712 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-211ENST00000553882 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 SRBD1Q8N5C6 995 aaKnown RBP16.6■□□□□ 0.25
ACTN1-211ENST00000553882 TRIML1Q8N9V2 468 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 NSUN4Q96CB9 384 aaKnown RBP16.6■□□□□ 0.25
ACTN1-211ENST00000553882 PAGE5Q96GU1 130 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 DESI2Q9BSY9 194 aa16.6■□□□□ 0.25
ACTN1-211ENST00000553882 TEX33O43247 280 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 PTGDRQ13258 359 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
ACTN1-211ENST00000553882 NPY5RQ15761 445 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 ADAMTS3O15072 1205 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 BRMS1Q9HCU9 246 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
ACTN1-211ENST00000553882 WNK3Q9BYP7 1800 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 ROBO1Q9Y6N7 1651 aa16.59■□□□□ 0.25
ACTN1-211ENST00000553882 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.25
ACTN1-211ENST00000553882 PHLPP2Q6ZVD8 1323 aa16.58■□□□□ 0.25
ACTN1-211ENST00000553882 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.25
ACTN1-211ENST00000553882 ZSCAN12O43309 604 aa16.58■□□□□ 0.25
ACTN1-211ENST00000553882 CLEC4GQ6UXB4 293 aa16.58■□□□□ 0.25
ACTN1-211ENST00000553882 CTCFLQ8NI51 663 aaPredicted RBP16.58■□□□□ 0.25
ACTN1-211ENST00000553882 CPLX3Q8WVH0 158 aa16.58■□□□□ 0.25
ACTN1-211ENST00000553882 DCP1AQ9NPI6 582 aaPredicted RBP16.58■□□□□ 0.25
ACTN1-211ENST00000553882 MTF1Q14872 753 aa16.58■□□□□ 0.24
ACTN1-211ENST00000553882 ARHGAP29Q52LW3 1261 aa16.58■□□□□ 0.24
ACTN1-211ENST00000553882 BLZF1Q9H2G9 400 aa16.58■□□□□ 0.24
ACTN1-211ENST00000553882 SYNRGQ9UMZ2 1314 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 MCM7P33993 719 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 WDR24Q96S15 920 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 ZNF446Q9NWS9 450 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 NLRP5P59047 1200 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 GNG11P61952 73 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 NR1I3Q14994 352 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 TNFRSF25Q93038 417 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 CCDC34Q96HJ3 373 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 THRAP3Q9Y2W1 955 aaKnown RBP16.57■□□□□ 0.24
ACTN1-211ENST00000553882 LAMB2P55268 1798 aa16.57■□□□□ 0.24
ACTN1-211ENST00000553882 TSPY2A6NKD2 308 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms