RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 POLR3DP05423 398 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-209ENST00000553855 ADD2P35612 726 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 GTF2A2P52657 109 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 VGLL4Q14135 290 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 TSHZ3Q63HK5 1081 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 ADGRA1Q86SQ6 560 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 CHD1LQ86WJ1 897 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 FOXP4Q8IVH2 680 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-209ENST00000553855 ZFPM1Q8IX07 1006 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 KBTBD3Q8NAB2 608 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 ZKSCAN4Q969J2 545 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-209ENST00000553855 EDC3Q96F86 508 aaKnown RBP10.02□□□□□ -0.81
PSEN1-209ENST00000553855 CLMNQ96JQ2 1002 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 SAGE1Q9NXZ1 904 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 FLT1P17948 1338 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 MAST2Q6P0Q8 1798 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 TRIM6-TRIM34B2RNG4 842 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 FOXN1O15353 648 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 RNF113AO15541 343 aaKnown RBP10.01□□□□□ -0.81
PSEN1-209ENST00000553855 CTNND1O60716 968 aaKnown RBP10.01□□□□□ -0.81
PSEN1-209ENST00000553855 TRPA1O75762 1119 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 PPATQ06203 517 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 SNAPC2Q13487 334 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-209ENST00000553855 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 LIMD1Q9UGP4 676 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 SAP30BPQ9UHR5 308 aaKnown RBP10.01□□□□□ -0.81
PSEN1-209ENST00000553855 COL2A1P02458 1487 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-209ENST00000553855 ATRNL1Q5VV63 1379 aa10.01□□□□□ -0.81
PSEN1-209ENST00000553855 MBD4O95243 580 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 IGHDP01880 384 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 CETPP11597 493 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 CD46P15529 392 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 GNAT2P19087 354 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 COL9A1P20849 921 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 INPP5BP32019 993 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 TM4SF4P48230 202 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 PDE1AP54750 535 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 NUCB1Q02818 461 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 PPIL2Q13356 520 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 TUSC1Q2TAM9 212 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 TMEM259Q4ZIN3 620 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 NOL9Q5SY16 702 aaKnown RBP10□□□□□ -0.81
PSEN1-209ENST00000553855 SH3BP5LQ7L8J4 393 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 SCYL3Q8IZE3 742 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 APPBP2Q92624 585 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 EVI5LQ96CN4 794 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 RIOK1Q9BRS2 568 aaKnown RBP10□□□□□ -0.81
PSEN1-209ENST00000553855 ARMT1Q9H993 441 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 AS3MTQ9HBK9 375 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 ATP8A2Q9NTI2 1148 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 MCM9Q9NXL9 1143 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 STAP2Q9UGK3 403 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 ZNF112Q9UJU3 913 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 PALD1Q9ULE6 856 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 RFX7Q2KHR2 1363 aa10□□□□□ -0.81
PSEN1-209ENST00000553855 CCL15-CCL14A0A0B4J2E2 113 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 APPP05067 770 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 PBX2P40425 430 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 LBX1P52954 281 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 CCL15Q16663 113 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 LCORLQ8N3X6 602 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 PI4K2BQ8TCG2 481 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 OTUD7AQ8TE49 926 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-209ENST00000553855 RILPL2Q969X0 211 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 ZIC5Q96T25 663 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 NACAP1Q9BZK3 213 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 CABP5Q9NP86 173 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 PRDM10Q9NQV6 1147 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 GINM1Q9NU53 330 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 RNF186Q9NXI6 227 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 SERPINB13Q9UIV8 391 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 SNCAIPQ9Y6H5 919 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 SLC4A4Q9Y6R1 1079 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 AK9Q5TCS8 1911 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 AKAP11Q9UKA4 1901 aa9.99□□□□□ -0.81
PSEN1-209ENST00000553855 TCRBV5S4A2TA0A5A2 114 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 PPP1R3GB7ZBB8 358 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 CXCL11O14625 94 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 ASNSP08243 561 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 HSPA8P11142 646 aaKnown RBP9.98□□□□□ -0.81
PSEN1-209ENST00000553855 CAP2P40123 477 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 MAP3K10Q02779 954 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 SLC4A8Q2Y0W8 1093 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 FASTKD5Q7L8L6 764 aaKnown RBP9.98□□□□□ -0.81
PSEN1-209ENST00000553855 TSKSQ9UJT2 592 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 ZHX2Q9Y6X8 837 aa9.98□□□□□ -0.81
PSEN1-209ENST00000553855 FAM196BA6NMK8 535 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 USP17L5A8MUK1 530 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 PHF20L1A8MW92 1017 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 ARHGAP33O14559 1287 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 SPTLC1O15269 473 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 DNAJB2P25686 324 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 TDO2P48775 406 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 MFAP1P55081 439 aaKnown RBP9.97□□□□□ -0.81
PSEN1-209ENST00000553855 TICAM2Q86XR7 235 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 SDR42E1Q8WUS8 393 aa9.97□□□□□ -0.81
PSEN1-209ENST00000553855 EHD4Q9H223 541 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms