RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 RXRAP19793 462 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 YY1P25490 414 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 SEC23AQ15436 765 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 MOB2Q70IA6 237 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 SNX21Q969T3 373 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 ZBTB21Q9ULJ3 1066 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 LIMCH1Q9UPQ0 1083 aa16.56■□□□□ 0.24
PRKCH-206ENST00000553830 PHF20L1A8MW92 1017 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 K7ELQ4 463 aaPredicted RBP16.55■□□□□ 0.24
PRKCH-206ENST00000553830 RAD21O60216 631 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 CAP2P40123 477 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 ICA1Q05084 483 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 TMEM179Q6ZVK1 233 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 LRRC47Q8N1G4 583 aaKnown RBP16.55■□□□□ 0.24
PRKCH-206ENST00000553830 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 NUP133Q8WUM0 1156 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 ALDH8A1Q9H2A2 487 aaPredicted RBP16.55■□□□□ 0.24
PRKCH-206ENST00000553830 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 CLIP2Q9UDT6 1046 aa16.55■□□□□ 0.24
PRKCH-206ENST00000553830 DAXXQ9UER7 740 aaPredicted RBP16.55■□□□□ 0.24
PRKCH-206ENST00000553830 PPP1R12BO60237 982 aaPredicted RBP16.54■□□□□ 0.24
PRKCH-206ENST00000553830 USP2O75604 605 aaPredicted RBP16.54■□□□□ 0.24
PRKCH-206ENST00000553830 GUCY1A2P33402 732 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 MCM2P49736 904 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 CCT2P78371 535 aaKnown RBP16.54■□□□□ 0.24
PRKCH-206ENST00000553830 MAP3K10Q02779 954 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 ME3Q16798 604 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 CCDC178Q5BJE1 867 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 SYNE3Q6ZMZ3 975 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 ZKSCAN4Q969J2 545 aaPredicted RBP16.54■□□□□ 0.24
PRKCH-206ENST00000553830 TMX3Q96JJ7 454 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 MTMR4Q9NYA4 1195 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 TAOK2Q9UL54 1235 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 SLC12A7Q9Y666 1083 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 PAPPA2Q9BXP8 1791 aa16.54■□□□□ 0.24
PRKCH-206ENST00000553830 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 DTNBO60941 627 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
PRKCH-206ENST00000553830 LIFRP42702 1097 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 IREB2P48200 963 aaKnown RBP16.53■□□□□ 0.24
PRKCH-206ENST00000553830 NT5C2P49902 561 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 CCDC83Q8IWF9 413 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 ZNF654Q8IZM8 581 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 TMEM47Q9BQJ4 181 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
PRKCH-206ENST00000553830 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
PRKCH-206ENST00000553830 MYH6P13533 1939 aa16.53■□□□□ 0.24
PRKCH-206ENST00000553830 PHIPQ8WWQ0 1821 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 GOLGA8AA7E2F4 631 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 ZBTB43O43298 467 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
PRKCH-206ENST00000553830 CELF2O95319 508 aaKnown RBP16.52■□□□□ 0.24
PRKCH-206ENST00000553830 TTLL1O95922 423 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.24
PRKCH-206ENST00000553830 TOP1P11387 765 aaKnown RBP16.52■□□□□ 0.24
PRKCH-206ENST00000553830 ZYXQ15942 572 aaKnown RBP16.52■□□□□ 0.24
PRKCH-206ENST00000553830 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 CATIPQ7Z7H3 387 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 DGKHQ86XP1 1220 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 KLRG1Q96E93 195 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 ZSCAN31Q96LW9 406 aaPredicted RBP16.52■□□□□ 0.24
PRKCH-206ENST00000553830 MTA3Q9BTC8 594 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 KANSL2Q9H9L4 492 aa16.52■□□□□ 0.24
PRKCH-206ENST00000553830 NCOA5Q9HCD5 579 aaKnown RBP16.52■□□□□ 0.24
PRKCH-206ENST00000553830 KIF3CO14782 793 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 ASNSP08243 561 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 PDIA3P30101 505 aaKnown RBP16.51■□□□□ 0.23
PRKCH-206ENST00000553830 METAP2P50579 478 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKCH-206ENST00000553830 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 RASGRP2Q7LDG7 609 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 ARMC9Q7Z3E5 817 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKCH-206ENST00000553830 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 CSADQ9Y600 493 aa16.51■□□□□ 0.23
PRKCH-206ENST00000553830 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
PRKCH-206ENST00000553830 UBE2Q2LH0YL09 131 aa16.5■□□□□ 0.23
PRKCH-206ENST00000553830 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
PRKCH-206ENST00000553830 VGLL4Q14135 290 aa16.5■□□□□ 0.23
PRKCH-206ENST00000553830 FBXL16Q8N461 479 aa16.5■□□□□ 0.23
PRKCH-206ENST00000553830 ACER1Q8TDN7 264 aa16.5■□□□□ 0.23
PRKCH-206ENST00000553830 FEZ1Q99689 392 aa16.5■□□□□ 0.23
PRKCH-206ENST00000553830 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
PRKCH-206ENST00000553830 ARHGEF10LQ9HCE6 1279 aa16.5■□□□□ 0.23
PRKCH-206ENST00000553830 SH2B1Q9NRF2 756 aaPredicted RBP16.5■□□□□ 0.23
PRKCH-206ENST00000553830 ECE1P42892 770 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms